G197331 (sept7,LOC108441798,LOC108272655)


Basic Information

Item Value
gene id G197331
gene name sept7,LOC108441798,LOC108272655
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 13378047 ~ 13438504 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU267842
GTGGTATCATCACAGTTTTATTACGTGACTTTGTAcaataaaaatgacagaaagaaaatgaagacaaatataaaatatggatGCTGTAAATAACcaaaagctaaatgtggctgTTTCGGAACATGACCAGCTCAGAGTGTGAGCtccaacagaacagaacagagctGTTACTAAAAGCCCAATCAGAAACAGCTAAAGCAGCAGCGCCACCACCTGGCAGTGAGTTACAGGAGAGAACATGGGAGAACTGGCTGAGATTTGAAGGATTGATCAATACTATTTAAAATTTTCTGTGGATgtagtaccaaaaaaaaaaaaaaagaaaagaaaaaaaaaaaaaagagttaaccAGGTGGCAGCGAGTTCTGATTTAGGCATTAAAGTAACAGCAATAAAAGCAGCTCACCACGCATTTAACATACAATTAAGAGAAGGAGACACTGTAGGTGGCAGCGATTGTGAGACAGGTGCGTGCTTATAAATGAGTCATAATtggggaggaaaaaaagaaaaaaaaagaaaagtaattcCCCTCACACAAAATAACCAAATATGCACACAGTTTCTTCTGCCTTTTCCTCtgttatacaaaatattttgcataaatccaTCTAAAAGCACAGCTGCACTTTCAAAAACAGGTTCTACCCAATATCATACCAGCACAAATGATGTTACATGTGgtctataataaaaaatataacaatatttcattcattctaaTGCTGTTAAAAGAGGTTTACATATTAATTAACAGAACCTTCTAGGCCACATTATGACACATTTATAAAGGCTCTGTGAATGGCTACGCTACCACTTTAACACACAGTGTCTCcgtaaacaacaaacaaaagtacTGTAGCAGGGCCAATATATACGAAGatgaaaaacagacaaaaatcaaaaacaaaagtgaatgaaaaagaatgaaacaaacaaaaaaaagttatacaATGCGGTCCAAGGCTAGATAACTTAAATTACACAAACTGAAGAGCTTAAcaattaagaaagaaaaaaaaattaaagccgcaaaaaaaaaaattcaacgaATGAATCGCCTGAGGTGTACTTCAGCCTTTAGGTTTAGGTTGCGGTCTGTCAGTATTGGAGGAGAAGGGCACCTTCAGAATTATAAAACAAGTGggtctcacacacaaacaaaacacacttaTGGGGCATCTAAACAAtagtaaacacattttttaggaACTGTTCACTTCCCTATATGGATTTATGGCTTTGGTTACACCAGTGTGTGTTCATCTGTAGCTGAATCATGGGCACTTTATAAATTAGAAATCATAGAAAATGATTGCGCAAGCTCGGGGTCCGGAGAGACGTTAGTGCACAGCTATTAGGCTCTTCCAGGGTAGATAAAGtcaatgtaatataaaatcatTTCAGACAAGGCTGAGTTTAATCTGAAAAACTTTAACAGGACGCCCCCTCTTCCTCTTACCGCcttaaagagacagacagacacgcaGACAAACAGACGCCAGGGTAAAAACAAAGAggcagtatttttctttttggtcAACTGACAGACAGTCCAGGCTGGCTTTATTGGCAACTAGtacgtggtggtggtggtggtccaaacactttaaaatatcttcttcttcttgtttttttccaaggTCCTGGAGGCATCGAGTTTCTGCTGCTCCACCAGTCGCTGCTGGACCTCCCAGTTGTTTTTCTCCTCCTCAAACtgcctcctcttctcctctagCTCCTTATGCTGCGCCTCCAGGTTCTTCTTCATCTGCTCATGACGTCTCTGCAACTCTGCCTCAGAGTCTTTCAGTTTCTGGAGCTTCTCCTTGACCTTCATCTCAAACACCTGCTCCATCTCCATTTCCATCTTCTTCATCTTAGCCACGTgatctctcctctcctcctccatctGCGCCAGAGGActcATGCCTTCAACTGTGTCAACtTTGGTTAGCTGGCCcttgttcttgttgttgtcAGCACCGTTGTAGGTGACTGCAGCAAGCTTCCTGCTGCGGTAGTTCTCGTAGTGGACGTTATTAGTCACATCCTTCAGGTCCTGCATGTGAGTTCTGATGAGCATGTTTCGTAGGATTGTGAAATCACAGTGCTCTCCATTctcaaCTTCAGCCACACCCCAAGGGTACTGTCTTCCTCTCACACGCTTTCCATTCACTTCTATAATGGTATTACTGCCAACAACTGCCAGGGGAAGCCGATCcTTTATCTTCTTCACTATTTTATTCTCCTCCTCATCGTCAGTTTCTGGGAATTCATAGGTTTTGATTTTATGCTCCTGGATTTCTCGCATTATctgctTCTTGAACTGTTGGCATTCCTCTGGAGTCATTGTGTCAGCTTTGGCAATGAGTGGAATGATGTTCACTTTTTCATGTAACCGTTTCATAAACTCAATATCCAGTGGCTTCAGTCCGTGTCCAGAGGGAGCAATGAAGTACAGGCAGCAGTGAACTCTATTGTCGGGCATCTGTCGTCTGTTGACTCGCGACTCTGCATTGAGGTAATCCTCAAACTTACTGTCAATGTGATCGATCACCGGCTGCcagCAGTTACTGTTGTCTACAGCATCCCCGAACCCAGGTGTGTCCACGATGGTCAGCAACAACTGCACTCCGCCCTCCTTTACCAACACCTTTGACTGCTCCACCTGCACAGTCTTCTTAATTCTGTGAGAAGGTCCAGGGTACTCTGCAGAATACAGGTCTGTGAGAAACAGGGAGTTGATGAGTGTAGATTTCCCAAGACCCGACTCCCCCATTCTGTCTCCGTGTCCGATCCCTCGGTTCCTACACCTCCTCACAACTCCGCCACGAccttacactatacactacgcATTCAGCGTAGCTTCCCCCAAACGTCTTTAAAGGAAACGTAAGCGTAGGGCGGCTTTCGTGAATATGGCTAGCACTGACTCTCGCGATACTGTAGAGGCCACACCAAAAATGTTTGctctcttttttgtgtgtgaagcGAAATGTGAAGTTTTATAAACACGTTTTAAAGACGTTTTGAACTAATTGACAACCAATAAGCGACTAATTATAATGAACAAAAGAACATAATGGATGCACCGGCGAACTTAGTCTGAAATAGTCTCAAATGCTCAATAGCTACGTTTCTGACTTGATCTCTGTCACCAGAGATATTACATATTCTAACCTAGCTTAATAATGTGGCCTGTGCAAAAGATGTAATACACGTTGTATATTAGTATAGATAGCACATGATGTCCTAACTGTGGCTACTTCATGTATTAACTAGGTACATTGATTACTTCAGCTCATTTCTGTGTAGGGCACTGcagtttaatgtgtgttttattgtggcCCAAATGATAATTTAGCCTATTTACAATCCTGCGCTTTCCCTGACATAGAAATACTAGTACTAGTGCTGACCTCTACTGGTGAAGGTACGATACTGcgttacagaaaaaaatctttactacaataaaatctTAGCAGTTAGGTTTTTTAGTCTATCCCGA
>TU267843
GTGGTATCATCACAGTTTTATTACGTGACTTTGTAcaataaaaatgacagaaagaaaatgaagacaaatataaaatatggatGCTGTAAATAACcaaaagctaaatgtggctgTTTCGGAACATGACCAGCTCAGAGTGTGAGCtccaacagaacagaacagagctGTTACTAAAAGCCCAATCAGAAACAGCTAAAGCAGCAGCGCCACCACCTGGCAGTGAGTTACAGGAGAGAACATGGGAGAACTGGCTGAGATTTGAAGGATTGATCAATACTATTTAAAATTTTCTGTGGATgtagtaccaaaaaaaaaaaaaaagaaaagaaaaaaaaaaaaaagagttaaccAGGTGGCAGCGAGTTCTGATTTAGGCATTAAAGTAACAGCAATAAAAGCAGCTCACCACGCATTTAACATACAATTAAGAGAAGGAGACACTGTAGGTGGCAGCGATTGTGAGACAGGTGCGTGCTTATAAATGAGTCATAATtggggaggaaaaaaagaaaaaaaaagaaaagtaattcCCCTCACACAAAATAACCAAATATGCACACAGTTTCTTCTGCCTTTTCCTCtgttatacaaaatattttgcataaatccaTCTAAAAGCACAGCTGCACTTTCAAAAACAGGTTCTACCCAATATCATACCAGCACAAATGATGTTACATGTGgtctataataaaaaatataacaatatttcattcattctaaTGCTGTTAAAAGAGGTTTACATATTAATTAACAGAACCTTCTAGGCCACATTATGACACATTTATAAAGGCTCTGTGAATGGCTACGCTACCACTTTAACACACAGTGTCTCcgtaaacaacaaacaaaagtacTGTAGCAGGGCCAATATATACGAAGatgaaaaacagacaaaaatcaaaaacaaaagtgaatgaaaaagaatgaaacaaacaaaaaaaagttatacaATGCGGTCCAAGGCTAGATAACTTAAATTACACAAACTGAAGAGCTTAAcaattaagaaagaaaaaaaaattaaagccgcaaaaaaaaaaattcaacgaATGAATCGCCTGAGGTGTACTTCAGCCTTTAGGTTTAGGTTGCGGTCTGTCAGTATTGGAGGAGAAGGGCACCTTCAGAATTATAAAACAAGTGggtctcacacacaaacaaaacacacttaTGGGGCATCTAAACAAtagtaaacacattttttaggaACTGTTCACTTCCCTATATGGATTTATGGCTTTGGTTACACCAGTGTGTGTTCATCTGTAGCTGAATCATGGGCACTTTATAAATTAGAAATCATAGAAAATGATTGCGCAAGCTCGGGGTCCGGAGAGACGTTAGTGCACAGCTATTAGGCTCTTCCAGGGTAGATAAAGtcaatgtaatataaaatcatTTCAGACAAGGCTGAGTTTAATCTGAAAAACTTTAACAGGACGCCCCCTCTTCCTCTTACCGCcttaaagagacagacagacacgcaGACAAACAGACGCCAGGGTAAAAACAAAGAggcagtatttttctttttggtcAACTGACAGACAGTCCAGGCTGGCTTTATTGGCAACTAGtacgtggtggtggtggtggtccaaacactttaaaatatcttcttcttcttgtttttttccaaggTCCTGGAGGCATCGAGTTTCTGCTGCTCCACCAGTCGCTGCTGGACCTCCCAGTTGTTTTTCTCCTCCTCAAACtgcctcctcttctcctctagCTCCTTATGCTGCGCCTCCAGGTTCTTCTTCATCTGCTCATGACGTCTCTGCAACTCTGCCTCAGAGTCTTTCAGTTTCTGGAGCTTCTCCTTGACCTTCATCTCAAACACCTGCTCCATCTCCATTTCCATCTTCTTCATCTTAGCCACGTgatctctcctctcctcctccatctGCGCCAGAGGActcctgctcacacacacacacgcagcacACAAATGGacacgcgcacgcacacacacacacaccacacagataCAAAACACACAGGCAGATGCACAGAAACAAACAATCATCAATTTGTTCTGGCGCAAAACGGCAAAAAAGAgcccaaaaacaaaaacacccaGTGAATATCCACCTGTGGGACAGAGGGGCGAGGAAAACGGAGGAAAAGGGAAAACCCGTAACACGGAAAGGCTTTAGGACCCAAAGCTATAGGGCTGAGCTTCTGAAGAGCCTGCATTAGTGAGCAAAGCTGCAACAGGGTTAGTGAACTGCGCAAAAGCGTAAAACACCAATTTCAACATTATTAGTGGTGATATAGAACATCAGTACTATGCCAATATTATCTGGGGTATATACCAGGTCAGATTTAAATATTTCTGTCTGATCCAAAAATGGATTAAggaagttataaaaaaaaaaactgttattgttCTTTACTATTAAGATGCAGcagaaacataaataaataaaatacaaaattaggCACTTACTAAttataaactgtgatgagacTGTGACTCTCAGCTTCAGATTAACTGCTTAATAAACTTACCATTAGCTAGCTACCATTAGTTACTGCAGCACAGCTTAAATTACTCTAAAgctttaaactgtaaataactTCTGCACATTGAAATATTATAGTACTTTT
>TU267846
GTGGTATCATCACAGTTTTATTACGTGACTTTGTAcaataaaaatgacagaaagaaaatgaagacaaatataaaatatggatGCTGTAAATAACcaaaagctaaatgtggctgTTTCGGAACATGACCAGCTCAGAGTGTGAGCtccaacagaacagaacagagctGTTACTAAAAGCCCAATCAGAAACAGCTAAAGCAGCAGCGCCACCACCTGGCAGTGAGTTACAGGAGAGAACATGGGAGAACTGGCTGAGATTTGAAGGATTGATCAATACTATTTAAAATTTTCTGTGGATgtagtaccaaaaaaaaaaaaaaagaaaagaaaaaaaaaaaaaagagttaaccAGGTGGCAGCGAGTTCTGATTTAGGCATTAAAGTAACAGCAATAAAAGCAGCTCACCACGCATTTAACATACAATTAAGAGAAGGAGACACTGTAGGTGGCAGCGATTGTGAGACAGGTGCGTGCTTATAAATGAGTCATAATtggggaggaaaaaaagaaaaaaaaagaaaagtaattcCCCTCACACAAAATAACCAAATATGCACACAGTTTCTTCTGCCTTTTCCTCtgttatacaaaatattttgcataaatccaTCTAAAAGCACAGCTGCACTTTCAAAAACAGGTTCTACCCAATATCATACCAGCACAAATGATGTTACATGTGgtctataataaaaaatataacaatatttcattcattctaaTGCTGTTAAAAGAGGTTTACATATTAATTAACAGAACCTTCTAGGCCACATTATGACACATTTATAAAGGCTCTGTGAATGGCTACGCTACCACTTTAACACACAGTGTCTCcgtaaacaacaaacaaaagtacTGTAGCAGGGCCAATATATACGAAGatgaaaaacagacaaaaatcaaaaacaaaagtgaatgaaaaagaatgaaacaaacaaaaaaaagttatacaATGCGGTCCAAGGCTAGATAACTTAAATTACACAAACTGAAGAGCTTAAcaattaagaaagaaaaaaaaattaaagccgcaaaaaaaaaaattcaacgaATGAATCGCCTGAGGTGTACTTCAGCCTTTAGGTTTAGGTTGCGGTCTGTCAGTATTGGAGGAGAAGGGCACCTTCAGAATTATAAAACAAGTGggtctcacacacaaacaaaacacacttaTGGGGCATCTAAACAAtagtaaacacattttttaggaACTGTTCACTTCCCTATATGGATTTATGGCTTTGGTTACACCAGTGTGTGTTCATCTGTAGCTGAATCATGGGCACTTTATAAATTAGAAATCATAGAAAATGATTGCGCAAGCTCGGGGTCCGGAGAGACGTTAGTGCACAGCTATTAGGCTCTTCCAGGGTAGATAAAGtcaatgtaatataaaatcatTTCAGACAAGGCTGAGTTTAATCTGAAAAACTTTAACAGGACGCCCCCTCTTCCTCTTACCGCcttaaagagacagacagacacgcaGACAAACAGACGCCAGGGTAAAAACAAAGAggcagtatttttctttttggtcAACTGACAGACAGTCCAGGCTGGCTTTATTGGCAACTAGtacgtggtggtggtggtggtccaaacactttaaaatatcttcttcttcttgtttttttccaaggTCCTACAGAGAAGAAGAACAAGGAGGAGGTTCAGAAccagagAGTCTTTCAGTTTCTGGAGCTTCTCCTTGACCTTCATCTCAAACACCTGCTCCATCTCCATTTCCATCTTCTTCATCTTAGCCACGTgatctctcctctcctcctccatctGCGCCAGAGGActcctgctcacacacacacacgcagcacACAAATGGacacgcgcacgcacacacacacacacaccacacagataCAAAACACACAGGCAGATGCACAGAAACAAACAATCATCAATTTGTTCTGGCGCAAAACGGCAAAAAAGAgcccaaaaacaaaaacacccaGTGAATATCCACCTGTGGGACAGAGGGGCGAGGAAAACGGAGGAAAAGGGAAAACCCGTAACACGGAAAGGCTTTAGGACCCAAAGCTATAGGGCTGAGCTTCTGAAGAGCCTGCATTAGTGAGCAAAGCTGCAACAGGGTTAGTGAACTGCGCAAAAGCGTAAAACACCAATTTCAACATTATTAGTGGTGATATAGAACATCAGTACTATGCCAATATTATCTGGGGTATATACCAGGTCAGATTTAAATATTTCTGTCTGATCCAAAAATGGATTAAggaagttataaaaaaaaaaactgttattgttCTTTACTATTAAGATGCAGcagaaacataaataaataaaatacaaaattaggCACTTACTAAttataaactgtgatgagacTGTGACTCTCAGCTTCAGATTAACTGCTTAATAAACTTACCATTAGCTAGCTACCATTAGTTACTGCAGCACAGCTTAAATTACTCTAAAgctttaaactgtaaataactTCTGCACATTGAAATATTATAGTACTTTT

Function

symbol description
sept7 septin 7

NR:

description
PREDICTED: septin-7 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU267842 True 3511 lncRNA 0.41 13 13378047 13438504
TU267843 False 2619 lncRNA 0.39 4 13378047 13382373
TU267846 False 2504 lncRNA 0.38 3 13378047 13382373

Neighbor

gene id symbol gene type direction distance location
LOC103042102 LOC108441815,LOC105906352,LOC107748379,LOC107550076,LOC106588678 coding upstream 58356 13301895 ~ 13319691 (+)
chtop chtop coding upstream 79168 13289714 ~ 13298879 (+)
LOC103032168 zgc:64022,LOC108441816,LOC107745031,LOC107550074,LOC107563933,LOC107748382,LOC107683352,LOC106569877 coding upstream 262076 13114501 ~ 13115971 (+)
LOC103031854 NA coding upstream 265994 13099037 ~ 13112053 (+)
thap7 NA coding upstream 283552 13089517 ~ 13094495 (+)
LOC103036187 LOC103036187,LOC108441814 coding downstream 988 13439492 ~ 13447223 (+)
LOC103036495 NA coding downstream 16199 13454703 ~ 13463236 (+)
LOC103042421 NA coding downstream 24795 13463299 ~ 13468103 (+)
LOC103043039 NA coding downstream 221383 13659887 ~ 13666328 (+)
LOC103039331 si:dkeyp-92c9.3,LOC108273295,LOC107672858,LOC107702514,LOC106570358,LOC107738593,LOC108411155,LOC107731552,LOC107571466 coding downstream 231839 13670343 ~ 13794112 (+)
G197325 snapin,LOC106569889 non-coding upstream 93530 13281682 ~ 13284517 (+)
G197317 NA non-coding upstream 137874 13237460 ~ 13240173 (+)
G197305 NA non-coding upstream 190193 13162293 ~ 13187854 (+)
G197309 NA non-coding upstream 233347 13143983 ~ 13144700 (+)
G197308 NA non-coding upstream 236565 13141169 ~ 13141482 (+)
G197341 NA non-coding downstream 15315 13453819 ~ 13475449 (+)
G197406 NA non-coding downstream 127864 13566368 ~ 13567811 (+)
G197410 NA non-coding downstream 147729 13586233 ~ 13605958 (+)
G197411 NA non-coding downstream 150501 13589005 ~ 13593041 (+)
LOC103039008 NA non-coding downstream 215180 13653684 ~ 13658653 (+)
G197334 LOC108441809 other upstream 15389 13324386 ~ 13362658 (+)
s100a14 s100a14,LOC108442988 other upstream 413698 12956670 ~ 12964349 (+)
LOC103029421 NA other upstream 449520 12889358 ~ 12928527 (+)
G197106 NA other upstream 603551 12715368 ~ 12774496 (+)
grhl2 grhl2,LOC107748368,LOC107550099,LOC107738316,LOC107698657,LOC107672862,LOC107552317 other upstream 1631812 11687399 ~ 11746235 (+)
rpa3 NA other downstream 838287 14276791 ~ 14293068 (+)
tac1 tac1 other downstream 1027761 14466265 ~ 14468882 (+)
G197665 NA other downstream 1355916 14794420 ~ 14796728 (+)
LOC103030137 prrc2a,LOC101471845,LOC102784426,LOC102311189 other downstream 2323419 15761923 ~ 15789854 (+)
ppp1r11 ppp1r11,LOC107694341 other downstream 2883438 16321942 ~ 16330240 (+)

Expression


Co-expression Network