G64169


Basic Information

Item Value
gene id G64169
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 4057217 ~ 4059152 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU73071
AAATCTAACCTGGCTGCTGGAGGAGTGGAAAGGAGGAGGAAAGAACAGCAGCACAGATAATGAACAGAAGAGAGTGACCAGCGTGGGAGAGAGAGAGAGAACGATAACAGCGGAGGAAGAGAAGAGCAAAAAAACAGAAAGATCATGAGCGGAGGAGAAGAGGAGAGGAAGATGGGCAGTCAAACGCAGCAGAATAAGCTGAGTTGAGTCGTTGGATACGCCCACATCCTGTAGGAGACCCTGAGGAGAATCTGCCAACAATGTTGAAATCGATTGACTTTTTTTCATGAAAAAGATTTCTCTACAATATCTCCACTTGTGGAGAACCAGATAAATCTGGGAAGCATCCATCATCCTGCTGACAAAAGCAGCTTAGACAAGCATGAATTCAAAGAGTGGCTTCTGCAGGTTAGCCCTGCTGATCTAGCTTGTGGACCAGATAGCAGCTAAAACTGCTGATTGACAGAAGTTCTTCCTTACTAAGTTTGGTTAAACTAGTGTAAAAAAATCTAAAAGGGGTTGAAGGGGACTTATGTTGATGTGTTTAAGGGGGTGCTAGTTCAAATCTGGCTTACGCCCTCATACAATCCCATCCCACTTCTATGTTTCCCTGCATTTTCCTGTCTAATCTATATCAGTGGTTCATAACCTTTTTGACTCCAAGGTCACCCACCCTCCACAACAATAGTCAAAGGCCATACTTTTCCAGTTGTTTATGATTTACTGGATAATGGTTAAGGATAAGAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGTATTTTTACTTATTTTACTAATATTTTAGAGCTCGGCTTAATTACAAAAATGTATATTCATAAAATGTATAAAATGCCAAAGATCCATTTATATGGATTTTCCAGGTCTAGAAATCTTCAAAAAAGAATTTGAGGGGAAGTCTTAAAATAAGAAATATCTTCATTTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU73071 True 949 lncRNA 0.38 2 4057217 4059152

Neighbor

gene id symbol gene type direction distance location
CI01000010_04028461_04031710 NA coding downstream 25507 4028297 ~ 4031710 (-)
CI01000010_03992093_03992619 NA coding downstream 63611 3991101 ~ 3993606 (-)
CI01000010_03961520_03974921 SLC44A5B, SLC44A5, SLC44A5A coding downstream 82296 3961419 ~ 3974921 (-)
CI01000010_03941555_03947042 NA coding downstream 110175 3941555 ~ 3947042 (-)
CI01000010_03914320_03915250 LRRIQ3 coding downstream 141967 3914252 ~ 3915250 (-)
CI01000010_04153653_04157398 NA coding upstream 92728 4151880 ~ 4158138 (-)
CI01000010_04311215_04316218 NA coding upstream 251582 4310734 ~ 4316671 (-)
CI01000010_04356379_04367982 NA coding upstream 297185 4356337 ~ 4368250 (-)
CI01000010_04374856_04376532 CENPH coding upstream 315356 4374508 ~ 4376946 (-)
CI01000010_04383043_04410672 MIER3B coding upstream 323719 4382871 ~ 4412332 (-)
G64168 NA non-coding downstream 1885 4054537 ~ 4055332 (-)
G64126 NA non-coding downstream 125591 3929616 ~ 3931626 (-)
G64119 NA non-coding downstream 137327 3919670 ~ 3919890 (-)
G62699 NA non-coding downstream 425213 3631538 ~ 3632004 (-)
G64332 NA non-coding upstream 158601 4217753 ~ 4220928 (-)
G64237 NA non-coding upstream 172041 4229950 ~ 4236416 (-)
G64382 NA non-coding upstream 223604 4282756 ~ 4283085 (-)
CI01000010_04433165_04436747 NA non-coding upstream 373755 4432907 ~ 4436929 (-)
G64280 NA non-coding upstream 445241 4504393 ~ 4521646 (-)
CI01000010_03890095_03899058 SSBP3B, SSBP3, SSBP2 other downstream 157306 3890069 ~ 3899058 (-)
CI01000010_03527436_03530341 NA other downstream 525565 3527408 ~ 3530359 (-)
G61965 NA other downstream 2512166 1424425 ~ 1545051 (-)
G61888 NA other downstream 2811199 1244469 ~ 1246018 (-)
G61045 NA other downstream 3481706 572753 ~ 575511 (-)
CI01000010_04612793_04613017 SMIM15 other upstream 553344 4612460 ~ 4613135 (-)
G64564 NA other upstream 990003 5049155 ~ 5242926 (-)
G64877 NA other upstream 1857105 5916257 ~ 5917011 (-)
G64918 NA other upstream 2034537 6093689 ~ 6096480 (-)

Expression


Co-expression Network