G62895


Basic Information

Item Value
gene id G62895
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 4092045 ~ 4095387 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU71638
ATTCATCTGTCACTTTGGTTTAAACTATATTTAGCCTAGTGTTTGTTCTATGTGTTATGCTGGTATTATTTATGCATTTATACAATTGTCCGTTTTGTCATATCAATAATTTAGCATATTGAAAAAAGCAGTTCATCAAAAAATAAATAAATATATGAATTTGAGGACATTTTTGTATGGTACTGTACTGTGTTAGGTCGACCTTAATGCAGTCTGTTCAGAAGAGTCATCTAGCATTTGTTTTTGATGATTTGATGCTGTCTGAAGCCTGCGAGTGTTTTGCAAGATCAAAAACTTTCATATTTGAGGAGACAGGCGTAGACTCAGCTCCTTTTAAACAGAAAGAGAAGAGAGAAAGCTCAATTATTCAGCTTTTGTTTTTTTTTCATCACATTCTACTGCGAAATTATTTCTGGTATCTGGTAGATGCTTTTATTCCAAGCGACTTTCAAAGTAAACCTAGTCAATTTATGTGTTCCCTGCAACTCCAACATTGACCTTGGCGTTATTAACAGCATGCTCTTTCAGTCGAGCTACAGGGAATGAAAAAATGTGTGCTTATGATGCAAATATCTACAAACCAACCCGATTATATAACAGAGAAAGACACTGCTCTGATTTAATGGAGCTCAGGGCAGTTTCTAGTTTTAAAAGTAGAGCTTTTAGTTCTTATTTTTGATGTTCCTCCTCCTTTGATGCCTGTTTTTGCACTTCACAGTGTTGTCAGTGATGCATTTTGTTGCGCAGCATTTGGCAAACCGCTTTGTGTTTTTGTTGTAGCCGATGTTGGATGTTCAGTGTATTATTGCATATGGTGTGTTTGTTTGAGTGTGCGTCGGCTCTCATGTCCGGATCTCTCGTCCACAGAGCTGCTGGCATCTGGCACGTATGGCACAGGAGAGAGTGTGTGTTGCCATGGCGATGATGGAAAAATTGAATTTGTGCCTGCCGCACCCTCAACCAGGCCGTTTCCAGGCGATTGGTATCAGCTTCACTAAAAGAGCTCTGTCAAGCAGGAAAGAGCGTTTAAAAGCAGCTCCTTCATGGGTGAATCACTTGAATGCATCATTGTGACTCAAAATCACTAACATGTCATGGAAGATGTGGCAGCCAACCACCCTGCCAAGTTTTCCAGTGCAAGAAGAGTCAAGTTTACATTTACAGTTGCTTTGGCTTATGGGACCTTATGACTGCAACAGTCAGTGAGGATTGTGGGATTGAGAAGAGAGACTACAATGAGGTATAGTTCATAACAAAATACACGATTTCATCTTCAACATTGAGAAATAAATTACTGTTATGTGGCCAATTGCTGAGCCAAGATGTCGAGCAGGGCTTCAGACCTATACATGCTGCCTAACAGGTCGAAGAACAGGTGTTTCGGTGCCCATCTGGATGATTATGATAGCAAACACGTAGCTGTTTCCTGAGCAGCTGTTACTGTGCTCTGTGAGGGGGATGAGCGTTTGTAGTTTTGTTGAAGTCTGTCACTGGTTTGATGAAGGAGAGGAACATTGTGAATTGTTTTGTTTGCTGGAAGAAGGTAGAGTATAATAACTTGCACTCGTCTGGCTGTTTTAAACATTTGTTGAAGGAAATATTTAGCTAAGAAATACATTTATTTAAAGGATTAGTCCATTTTTAAATTAAAATTTCCTGATAATTTACTCACCCCCATGTCATCTAAGATGTCCATGTCCTTCTTTCTTCAGTCGAAAAGAAATTAAGGTTTTTGAGGAAAACATTCCAGGATTTTTCTCCATATAGTGGACTTGAAGGTAAAAATTACAGTTTCAGTGCAGCTTCAAAGGGCTTTAAACGATACCAGACGAGGAATAAGGGTCTTATCTAGAGAAACAATTGGTCATTTTCTAAAATTTTTTTAAATGTATGCACTTTATATAAACAAATGATCGCCTTCAAGTGGTTCCGCCAAAACCGCACTTCCGTATTCTTCAAAAAGCTTACGCTGTATGTCCTACGCCTCCCTATTCTACTTACGGAAAAAACGGAACTGGCGCCGCGTTCGTTCCTCATCTGGCATCGACCCTTATTCCTCGTCTGGTATCGTTTAAGGCCCTTTGAAGCTCCACTGAAACTGTAATTTTTACCTTCAACCGTTTGGAGACCATTGAAATCCACTATATGGAGAAAAATCCTGGAATGTTTTCCTCAAAAACCTTCCTTTCTTTTCGACTGAAGAAAGAAATACATAAATATCTTGGATGACATGGGGGTGAGTAAATTATCATGAAATTTTAATTGGAAAGTGAACTAATCCTTTAAGGGTGCCATGTTTTAGCATTTAGCATTTTAGCACTGTAGCATTTTATTTTTCACCTGAAGTCCATTATAAGTGAAAAAGTCATGTGCTGTGTCCGAAATCTCTCCCTATACCCTCATTCACTATTCACTACATTAGTCCACTAATATAGTTCGCTTGAGGGAGTGAATGAAAACAAGTGAGCGAATTCAGACACTGAGTGTGCCGGAAGGGCTGCTGCTTTTGCATAGTTTGTGTTTAATAATTATTTGAAATATTAATTATACCTAGCAAACTGGCAGCTCCAGTAGTAAGATGAAAATATTTATCTTGAAGTCTAGCTTGAACTAGTCTTGAACTAGCATGTATAGACCTTAATTATACAATGTAATAATCTATTAAAAAGGAGTTTATACCTGTATGATATTACACTTTACCCACATTCGACCAGTGGTTTGGAAAATGGATGGATGGAGAATTCAGCTGTGGGCGCCGTCTTCTGGTCAGACGCGGAGATTAATTCACTGCGCGACTTTCATAGTGCATTATGGGTATTCTCTAGCTGTTGAGCGTACATCGGTTATACACTCGTTATTGTGGTGCATTGTGGGATTGAATGAGTGCACTCGATAACGTCCACTATGTTGCTGTCTGGGTATGGATTTGGACACTACTACAAATGGCTGTCCCCTCAAACAGTGCCCTATTTAAGGGTATATGGGACGATTTCGGACACAACCATAGTTAACAGGGTTAACAGGTTTTTTTTTTTTATACTATACCTTTAAGATATACTACCATTTAAAGTTTGGGGTCAGTAAGATTTTTTTTAAAGAAATTAATTAAAATTTTGATAAGACATTTATAATTTTACAAAGGATTTATATTTCAAATAAATGCTGTTCTTTTGAACTTTCTATTCATTACAATATCCTGACAAAAATGTATCATGGTTTCTACAAGAATTTTAAGCAGCACAACTATTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71638 True 3250 lncRNA 0.38 2 4092045 4095387

Neighbor

gene id symbol gene type direction distance location
CI01000010_04025764_04026729 NA coding upstream 64779 4025361 ~ 4027266 (+)
CI01000010_04010515_04020837 ST6GALNAC5B coding upstream 71147 4010515 ~ 4020898 (+)
CI01000010_03952874_03957173 NA coding upstream 134801 3952874 ~ 3957244 (+)
CI01000010_03920171_03935066 TNNI3K coding upstream 156186 3920171 ~ 3935859 (+)
CI01000010_03915860_03918633 FPGT coding upstream 172908 3915860 ~ 3919137 (+)
CI01000010_04165584_04232583 SKIA, SKI coding downstream 70197 4165584 ~ 4232583 (+)
CI01000010_04368541_04374080 NA coding downstream 273084 4368471 ~ 4374174 (+)
CI01000010_04377762_04378990 MRPS36 coding downstream 281760 4377147 ~ 4379082 (+)
CI01000010_04437892_04443935 RAB3C coding downstream 342042 4437429 ~ 4444446 (+)
CI01000010_04534309_04549864 NA coding downstream 438791 4534178 ~ 4549959 (+)
G62893 NA non-coding upstream 30855 4054595 ~ 4061190 (+)
G62871 NA non-coding upstream 110559 3966589 ~ 3981486 (+)
G62869 NA non-coding upstream 126905 3964653 ~ 3965140 (+)
G62868 NA non-coding upstream 127882 3963748 ~ 3964163 (+)
G62788 NA non-coding upstream 245604 3818656 ~ 3846441 (+)
G62923 NA non-coding downstream 195698 4291085 ~ 4291311 (+)
G62925 NA non-coding downstream 201974 4297361 ~ 4297627 (+)
G62926 NA non-coding downstream 204306 4299693 ~ 4299922 (+)
G62930 NA non-coding downstream 209678 4305065 ~ 4305265 (+)
G62934 NA non-coding downstream 211534 4306921 ~ 4326352 (+)
G62856 NA other upstream 152100 3937757 ~ 3939945 (+)
G62838 NA other upstream 198252 3890095 ~ 3893793 (+)
CI01000010_03320340_03346243 NA other upstream 760859 3313695 ~ 3347796 (+)
CI01000010_03197380_03199958 NA other upstream 892137 3197380 ~ 3200044 (+)
CI01000010_00946586_00947327 NA other upstream 3144501 945182 ~ 947577 (+)
G62983 NA other downstream 352785 4448172 ~ 4449327 (+)
CI01000010_04640858_04683752 OSBPL9 other downstream 545454 4640516 ~ 4683778 (+)
G63403 NA other downstream 1600058 5695445 ~ 5707085 (+)
G63405 NA other downstream 1612584 5707971 ~ 5717250 (+)
CI01000010_05789479_05790006 NA other downstream 1661566 5788332 ~ 5790204 (+)

Expression


Co-expression Network