G197665


Basic Information

Item Value
gene id G197665
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 14794420 ~ 14796728 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU268380
CGAAGCAGAGGTTGAAGATGGCGGACAGCGGCGACGCGGGTCTTTACAAGTGGAGTGATGAGGACACCAGGGAGCTGATCCGGTGGAGGGTGGCCAATGAGGCCCTCTTCACCGGAAAAAGAAATGCAGCAGTTCGAGGATTTGAAGCCTTCGTGTTGGAGAAAAAGTTGAAAGGGAAGGTGACCCCTGTCTTCGTAAAGAAGAAATGGGAGAACCTAAAACAAAAGTACGAGGAACTCAGGTGCCCCCCTACTGGGGTGAGTACTGAGGGTGGTGAAGCAACAGCAGCATCCTGGAAATGGTATACTGCCATGGATGAGGCAATAGGTGGGAGGCCATCAATTAGCCCACCCACCCTTATTGTCTCATCTGGCCAGGGTGCTGCTGAAGCTTCAACACCCTCTTGTAGGCCAGGAGACAACCAGACCCCAGGCAGGAAAAGGCAGAGGGAGACCGACCTCatagtttttttaaaggagatGGAAGAGagggaaaatgagagagagcgagaggcagcagagagagaggagaggcgaTGGCAAGAggctgaggagagagaggaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU268380 True 565 TUCP 0.53 4 14794420 14796728

Neighbor

gene id symbol gene type direction distance location
sdhaf3 sdhaf3 coding upstream 429743 14350057 ~ 14364677 (+)
col28a1 NA coding upstream 455018 14301910 ~ 14339402 (+)
LOC111195557 NA coding upstream 805482 13987037 ~ 13988938 (+)
LOC103030231 NA coding upstream 889382 13902767 ~ 13905038 (+)
LOC103039331 si:dkeyp-92c9.3,LOC108273295,LOC107672858,LOC107702514,LOC106570358,LOC107738593,LOC108411155,LOC107731552,LOC107571466 coding upstream 1000308 13670343 ~ 13794112 (+)
jarid2 jarid2 coding downstream 280816 15077544 ~ 15259664 (+)
mylip mylip,mylipa,LOC107754815,LOC107731572,LOC107694366 coding downstream 604195 15400923 ~ 15434466 (+)
LOC103027820 npr1,npr1a,LOC108435512,LOC107694365,LOC107677481,LOC107754786,LOC106588322 coding downstream 668764 15465492 ~ 15582858 (+)
ints3 ints3,LOC107754816 coding downstream 795715 15592443 ~ 15611187 (+)
LOC103028143 LOC108273188 coding downstream 818445 15615173 ~ 15632584 (+)
G197663 bloc1s4,LOC105910270,LOC108410562,LOC107731556,LOC107598233,LOC107672822,LOC108272578 non-coding upstream 3210 14789870 ~ 14791210 (+)
G197662 NA non-coding upstream 8680 14785121 ~ 14785740 (+)
G197639 asns,LOC107672863,LOC107754811 non-coding upstream 20958 14771795 ~ 14773462 (+)
G197657 NA non-coding upstream 49404 14737355 ~ 14745016 (+)
G197646 LOC107731557,LOC107754811,LOC107702657,LOC107672863 non-coding upstream 74882 14675521 ~ 14719538 (+)
G197716 NA non-coding downstream 502884 15299612 ~ 15355237 (+)
G197747 NA non-coding downstream 591826 15388554 ~ 15393678 (+)
G197848 sacm1l,LOC108435519,LOC107595621 non-coding downstream 1024750 15821478 ~ 15842757 (+)
G197879 NA non-coding downstream 1348783 16145511 ~ 16146073 (+)
G197881 NA non-coding downstream 1349757 16146485 ~ 16148110 (+)
tac1 tac1 other upstream 325538 14466265 ~ 14468882 (+)
rpa3 NA other upstream 501352 14276791 ~ 14293068 (+)
G197334 LOC108441809 other upstream 1431762 13324386 ~ 13362658 (+)
s100a14 s100a14,LOC108442988 other upstream 1830071 12956670 ~ 12964349 (+)
LOC103029421 NA other upstream 1865893 12889358 ~ 12928527 (+)
LOC103030137 prrc2a,LOC101471845,LOC102784426,LOC102311189 other downstream 965195 15761923 ~ 15789854 (+)
ppp1r11 ppp1r11,LOC107694341 other downstream 1525214 16321942 ~ 16330240 (+)
atat1 atat1 other downstream 1548389 16345117 ~ 16359668 (+)
c23h5orf49 cunh5orf49,LOC103039620 other downstream 1592080 16388808 ~ 16393498 (+)
LOC111195522 LOC107679107,LOC107679108 other downstream 1627889 16424617 ~ 16430534 (+)

Expression


Co-expression Network