G62923


Basic Information

Item Value
gene id G62923
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 4291085 ~ 4291311 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU71672
AGTTCCTTGATTATTACACTGGAATGACAGTATAGTTCCTAGCCATATCGGCCTAGAAAATCGCAACTTTTCATTTTCTGTTGGTTTTAGTACACAATGTAACTACAGAAGAGTCAAGTTTTAAATAGGAAAAATATCGAAACTCTTTGGTCATTTTTGAGTGAGATGCTAACGGTCTAATCAGATTCAATGAACTATGCTAAGCTATGCTAAAAGTGGTACCGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71672 True 227 lncRNA 0.36 1 4291085 4291311

Neighbor

gene id symbol gene type direction distance location
CI01000010_04165584_04232583 SKIA, SKI coding upstream 58502 4165584 ~ 4232583 (+)
CI01000010_04046204_04137642 PRKCZ coding upstream 153443 4046204 ~ 4137642 (+)
CI01000010_04025764_04026729 NA coding upstream 263819 4025361 ~ 4027266 (+)
CI01000010_04010515_04020837 ST6GALNAC5B coding upstream 270187 4010515 ~ 4020898 (+)
CI01000010_03952874_03957173 NA coding upstream 333841 3952874 ~ 3957244 (+)
CI01000010_04368541_04374080 NA coding downstream 77160 4368471 ~ 4374174 (+)
CI01000010_04377762_04378990 MRPS36 coding downstream 85836 4377147 ~ 4379082 (+)
CI01000010_04437892_04443935 RAB3C coding downstream 146118 4437429 ~ 4444446 (+)
CI01000010_04534309_04549864 NA coding downstream 242867 4534178 ~ 4549959 (+)
CI01000010_04609294_04611679 NDUFAF2 coding downstream 317878 4609189 ~ 4611710 (+)
G62895 NA non-coding upstream 195698 4092045 ~ 4095387 (+)
G62893 NA non-coding upstream 229895 4054595 ~ 4061190 (+)
G62871 NA non-coding upstream 309599 3966589 ~ 3981486 (+)
G62869 NA non-coding upstream 325945 3964653 ~ 3965140 (+)
G62868 NA non-coding upstream 326922 3963748 ~ 3964163 (+)
G62925 NA non-coding downstream 6050 4297361 ~ 4297627 (+)
G62926 NA non-coding downstream 8382 4299693 ~ 4299922 (+)
G62930 NA non-coding downstream 13754 4305065 ~ 4305265 (+)
G62934 NA non-coding downstream 15610 4306921 ~ 4326352 (+)
G62947 NA non-coding downstream 35178 4326489 ~ 4326710 (+)
G62856 NA other upstream 351140 3937757 ~ 3939945 (+)
G62838 NA other upstream 397292 3890095 ~ 3893793 (+)
CI01000010_03320340_03346243 NA other upstream 959899 3313695 ~ 3347796 (+)
CI01000010_03197380_03199958 NA other upstream 1091177 3197380 ~ 3200044 (+)
CI01000010_00946586_00947327 NA other upstream 3343541 945182 ~ 947577 (+)
G62983 NA other downstream 156861 4448172 ~ 4449327 (+)
CI01000010_04640858_04683752 OSBPL9 other downstream 349530 4640516 ~ 4683778 (+)
G63403 NA other downstream 1404134 5695445 ~ 5707085 (+)
G63405 NA other downstream 1416660 5707971 ~ 5717250 (+)
CI01000010_05789479_05790006 NA other downstream 1465642 5788332 ~ 5790204 (+)

Expression


Co-expression Network