G62947


Basic Information

Item Value
gene id G62947
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 4326489 ~ 4326710 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU71696
TTGGATTCCCCATACAAATAATGATAAAACTGTAAGTAGCTTTGGTTAAAAGTGTCTGCTAACTAAGTGTCTCTTTACTGTGCTGCTTTCACACTGTTAACCACAACTAGCTTTACAATTCTTGTTTATTATGAATGTTTGTCATTGTAATACTAATATTGCTGTTTTCTTTGCAAGTGATGTTTTATGTTTTTCCTCAATTGTAAGCCACCTTGATTAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71696 True 222 lncRNA 0.32 1 4326489 4326710

Neighbor

gene id symbol gene type direction distance location
CI01000010_04165584_04232583 SKIA, SKI coding upstream 93906 4165584 ~ 4232583 (+)
CI01000010_04046204_04137642 PRKCZ coding upstream 188847 4046204 ~ 4137642 (+)
CI01000010_04025764_04026729 NA coding upstream 299223 4025361 ~ 4027266 (+)
CI01000010_04010515_04020837 ST6GALNAC5B coding upstream 305591 4010515 ~ 4020898 (+)
CI01000010_03952874_03957173 NA coding upstream 369245 3952874 ~ 3957244 (+)
CI01000010_04368541_04374080 NA coding downstream 41761 4368471 ~ 4374174 (+)
CI01000010_04377762_04378990 MRPS36 coding downstream 50437 4377147 ~ 4379082 (+)
CI01000010_04437892_04443935 RAB3C coding downstream 110719 4437429 ~ 4444446 (+)
CI01000010_04534309_04549864 NA coding downstream 207468 4534178 ~ 4549959 (+)
CI01000010_04609294_04611679 NDUFAF2 coding downstream 282479 4609189 ~ 4611710 (+)
G62934 NA non-coding upstream 137 4306921 ~ 4326352 (+)
G62930 NA non-coding upstream 21224 4305065 ~ 4305265 (+)
G62926 NA non-coding upstream 26567 4299693 ~ 4299922 (+)
G62925 NA non-coding upstream 28862 4297361 ~ 4297627 (+)
G62923 NA non-coding upstream 35178 4291085 ~ 4291311 (+)
G62948 NA non-coding downstream 3048 4329758 ~ 4329998 (+)
G62980 NA non-coding downstream 68270 4394980 ~ 4482134 (+)
G62982 NA non-coding downstream 118806 4445516 ~ 4447186 (+)
G63006 NA non-coding downstream 148961 4475671 ~ 4480575 (+)
G63052 NA non-coding downstream 217512 4544222 ~ 4544452 (+)
G62856 NA other upstream 386544 3937757 ~ 3939945 (+)
G62838 NA other upstream 432696 3890095 ~ 3893793 (+)
CI01000010_03320340_03346243 NA other upstream 995303 3313695 ~ 3347796 (+)
CI01000010_03197380_03199958 NA other upstream 1126581 3197380 ~ 3200044 (+)
CI01000010_00946586_00947327 NA other upstream 3378945 945182 ~ 947577 (+)
G62983 NA other downstream 121462 4448172 ~ 4449327 (+)
CI01000010_04640858_04683752 OSBPL9 other downstream 314131 4640516 ~ 4683778 (+)
G63403 NA other downstream 1368735 5695445 ~ 5707085 (+)
G63405 NA other downstream 1381261 5707971 ~ 5717250 (+)
CI01000010_05789479_05790006 NA other downstream 1430243 5788332 ~ 5790204 (+)

Expression


Co-expression Network