XLOC_000751 (adgre16)


Basic Information

Item Value
gene id XLOC_000751
gene name adgre16
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 55535827 ~ 55540577 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001241
AATCAGAGCTCTGGATGTCTAAAAAATCTTCTTGAGCAGATAGAGAACATTACAGCTCAAGAGCTTCCACTGAATACGGTGACCGACATTTTGACTGTGGTCTTCAACGCTTCAGAGAAGATTTCAGTGTCTTCATCATCAGCCAGTCCAGCTCAGCTAGCCTCATATGGAACTAAAGTGTTGAAAAGCAGCGAGAAACTCATTTCTACATTGGTGAAGCCGACAGAAACAAGTGCCAATGTCAGTTTTACTCTTGCAGCTGTAGAGGGACAAGTCTTCATGGTTGGACCACAGGTGACCTTAGATAAAATCCCTCAACTTGACACAACAAATTCTTCTGTAGACATCGATCTTATTGGCATCGCCAAGAACAACAATAACAGATCTGCTGTGGCTTTCATGAGCTACACCACAATGGAGAATCTACTGAAGGCCGACTTCTTCAACACAACTAATGACACCATTAAAACCATGATGTCCACTGTGATCTCAGCTACTCTTCCCAAAACCAGCAACACTGCACTCACCAAAGCAGTCAACTTCACCTTCAGACACATCAGAGAGTTTGACCCCAGCGGTTCTCTGTCCTGTGTGTACTGGAATATCAGCGAGTGGATTGTAGATGGTTGTTCTGTGTTAAACAGCAACAGCAGCCACACTGTGTGTTCCTGTGTTCATCTGTCCACATTCGCTCTCATCATGCAGACCAGCAGCAGTCCACCACCGAGCGATCTGCTGGAGCTGCTGGATCTGGTGTGTGTGATCGTGGGTCTGGTGTTCTTCAGTTTGGCTCTGTTGTCCTTTGCTCTTTGTCAGTGGAGTCCTGGAGTCAATAATGTGGCTCGAATCAACATCTGCATCAGTCTGCTGTCGGCTCACCTTCTGTTTCTGCTCACACAACAGTTCCTGAGCCTCATTCGCCCTCAGCAGGTGTTGTGTGTGGCGATAGCAGGCCTTCTGCACTTCCTCTTCCTCTCCGCCTTTGTGTGGATGTTCATTGAAGCTGTGCTGCTCTTCATCTGTGTCAAAAACCTGTCACAGATCAGCTCCAAAAAGAGGGAGGTGCTTAGCAGTGGGTTCCTGTGTGTGATTGGATATGTGCTTGCTATGGTTGTGGTGTGTGTGTCTATTGGGCTGGTTCCAGAAGGATACGGCAGTGAACATTGCTGGATTAAAACAGATGAAGGGTTTATCTGGAGTTTTCTGGGTCCTGTTTGTGTCATACTAGCAtTAAACTTGATTCTCTTCATTAAAATCGTCATCACTCTGAACTCGACTCTCAAAAATCTCAATGCTGAAGTCTCACAGATGAAGCAAACCAAGGTTATGGTGTTTAAAACACTGGGTCAGTTTGTGGTTCTTGGTTGTCCTTGGATTCTGGGTTTCTTCACTAATAGCAGTGAGGTGCTGGAGATCGTCTTCCTGGTCTTGAACTCTCAGCAGGGAACCTTCATCTTCCTGATCTACTGTGTGCTCAATAATG

Function

symbol description
adgre16 Predicted to enable G protein-coupled receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and cell surface receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane.

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007189 adenylate cyclase-activating G protein-coupled receptor signaling pathway biological_process
GO:0007166 cell surface receptor signaling pathway biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004888 transmembrane signaling receptor activity molecular_function
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-121214-46 Predicted to enable G protein-coupled receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and cell surface receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane.

Ensembl:

ensembl_id ENSDARG00000096622

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001241 True 1483 mRNA 0.46 10 55535827 55540577

Neighbor

gene id symbol gene type direction distance location
XLOC_000750 adgre9 coding upstream 20643 55478653 ~ 55515184 (+)
XLOC_000745 NA coding upstream 58692 55370138 ~ 55477135 (+)
XLOC_000749 CR788255.1 coding upstream 82075 55452892 ~ 55453752 (+)
XLOC_000748 NA coding upstream 96552 55437572 ~ 55439275 (+)
XLOC_000747 NA coding upstream 142795 55392380 ~ 55393032 (+)
XLOC_000752 adgre15 coding downstream 22955 55563532 ~ 55574266 (+)
XLOC_000753 adgre19 coding downstream 42539 55583116 ~ 55587666 (+)
XLOC_000754 umod coding downstream 59927 55600504 ~ 55606573 (+)
XLOC_000755 adgre18 coding downstream 67943 55608520 ~ 55617155 (+)
XLOC_000756 adgre7 coding downstream 102621 55643198 ~ 55646413 (+)
XLOC_000746 NA non-coding upstream 150376 55385192 ~ 55385451 (+)
XLOC_000744 NA non-coding upstream 165988 55369517 ~ 55369839 (+)
XLOC_000758 NA non-coding downstream 138335 55678912 ~ 55679447 (+)
XLOC_000760 NA non-coding downstream 174341 55714918 ~ 55729126 (+)
XLOC_000761 NA non-coding downstream 177001 55717578 ~ 55721415 (+)
XLOC_000768 NA non-coding downstream 876061 56416638 ~ 56556305 (+)
XLOC_000772 NA non-coding downstream 1020649 56561226 ~ 56604352 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000181_00661731_00680605 ADGRE9 coding CI01000181 null 661641 ~ 681341 (-)