G63006


Basic Information

Item Value
gene id G63006
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 4475671 ~ 4480575 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU71764
CACAACCACACACATACACTTGAACATTCTCAAAGCAAGGTCGTGTTTGCTTAGCTGAGAGCTGTTATTCATGGAGACCAAATGGAGCATTCCACGAGCAAAGGGGGTGAGTTTATATCAAGCTGGCAGGCGTTCCAAGCAAAAGTGCTAAGAAAGTGAGAAAGAGGAGAACCGCCTGGAGATTCCCTAGCCATGGTGTCCTGATGAAACCGACAGCTTGACTGACCTCAAATAAGAGAGCTTCAGCTTTGTGTGAGGAAAATGTCCACGTCACTACTCTGACTTCATCCCATAATCCAATAACACCTGTCTGGCCTTCTCGCATTCAACTGCCAAGTCAGAAACACAAGCTTCAGTGCTGATAAACTGTACATGAAACTATGTCACCAGAAAGCAATCAGCTTTGAAAAATAGATTATAGTTTTGTAAACCTGTAAAAACAATTGTATATACTGTATGTTGTCCTTTGTCCTCCAAGCATGCAGTAATTATAGTGTGGTTTGGGATTAACTTAATTTCAGCAAGAGACGAGAAAGTGCTTGTTGCACGAGAAAGTGCTTGTTGCACAAGACAGAGCTAAATGTTACTTTTTTTTTTGCAAACACATTCTAAAATAGCTAAGCTGAAATCAAAACATTTGAACCCTTACTGATATTTTAAGTTTAAGTTTTTTTTTCTTGCACAAAGTTTTTAAGCTTAACAGAGCTAACGCCTCAAAAAGGACATTCAAATGAAATTCTGTGTTATGAAATTCACTCATTCAGCTCTGTTACAGGGCCATAAACATTTAATATTCAATATTTAAGTTTATATAAAAAATGTAAAAGTTCTGTGGTCGTATTTGTTTCTATTTAGTGCTTTGAAAGAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71764 True 874 lncRNA 0.37 2 4475671 4480575

Neighbor

gene id symbol gene type direction distance location
CI01000010_04437892_04443935 RAB3C coding upstream 31225 4437429 ~ 4444446 (+)
CI01000010_04377762_04378990 MRPS36 coding upstream 96589 4377147 ~ 4379082 (+)
CI01000010_04368541_04374080 NA coding upstream 101497 4368471 ~ 4374174 (+)
CI01000010_04165584_04232583 SKIA, SKI coding upstream 243088 4165584 ~ 4232583 (+)
CI01000010_04046204_04137642 PRKCZ coding upstream 338029 4046204 ~ 4137642 (+)
CI01000010_04534309_04549864 NA coding downstream 53603 4534178 ~ 4549959 (+)
CI01000010_04609294_04611679 NDUFAF2 coding downstream 128614 4609189 ~ 4611710 (+)
CI01000010_04614357_04631136 NA coding downstream 133654 4614229 ~ 4631460 (+)
CI01000010_04640858_04683752 OSBPL9 coding downstream 159941 4640516 ~ 4683778 (+)
CI01000010_04686730_04692395 CALR coding downstream 206085 4686660 ~ 4692633 (+)
G62982 NA non-coding upstream 28485 4445516 ~ 4447186 (+)
G62948 NA non-coding upstream 145673 4329758 ~ 4329998 (+)
G62947 NA non-coding upstream 148961 4326489 ~ 4326710 (+)
G62934 NA non-coding upstream 149319 4306921 ~ 4326352 (+)
G62930 NA non-coding upstream 170406 4305065 ~ 4305265 (+)
G63052 NA non-coding downstream 63647 4544222 ~ 4544452 (+)
G63053 NA non-coding downstream 64084 4544659 ~ 4544858 (+)
G63056 NA non-coding downstream 71624 4552199 ~ 4552403 (+)
G63069 NA non-coding downstream 74177 4554752 ~ 4554981 (+)
G63070 NA non-coding downstream 76417 4556992 ~ 4557299 (+)
G62983 NA other upstream 26344 4448172 ~ 4449327 (+)
G62856 NA other upstream 535726 3937757 ~ 3939945 (+)
G62838 NA other upstream 581878 3890095 ~ 3893793 (+)
CI01000010_03320340_03346243 NA other upstream 1144485 3313695 ~ 3347796 (+)
CI01000010_03197380_03199958 NA other upstream 1275763 3197380 ~ 3200044 (+)
G63403 NA other downstream 1214870 5695445 ~ 5707085 (+)
G63405 NA other downstream 1227396 5707971 ~ 5717250 (+)
CI01000010_05789479_05790006 NA other downstream 1276378 5788332 ~ 5790204 (+)
G63524 NA other downstream 1893983 6374558 ~ 6374667 (+)

Expression


Co-expression Network