G63096


Basic Information

Item Value
gene id G63096
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 4772221 ~ 4773699 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU71876
TGTAAACACACTTTTATTTTGGTTTCGATTAATCATTTGACAGCACTAATATATATATATAATATAATATATATATATTCTGCATTAAAATGTCAAAATATTGACTGTCACATGTTGGTCAAGCTGAAATGTTTTGTTGATTTTTGCTTTGTGAATCATGTTGTTTTTGTTTTTTTTTCTTTCCTTTACATAGTTTTAAAATCATCATTACTGTTATTGTAGTAACACAACTGAAAAAATGTATTTACAGACAAAAAAACACTGAAGTCATCAAAAGTCTGAAGGTGGCTTTGAGGTCAGCCTAGAGTGATTAATGCAACATTAGGCCGTAGTGACTCACGAAAGTACACGTATGAGTGTACAAAACTGCTCGATAATGATAATTTCACCTTCATTGCTGGTGCACTTGTGTGTTTTGTTAACTTTATTGTACATAGTGCAATGATATGTATTTTAGTTGCTTTTATTTGAATTCTCAGTACCAGATACTTTAAAAGAAGTCTTTATGACATCATAAGGGACTCATAAGCCTAAAAAAAAATAAACAGCTGAATCCATGAAAGATTCAAATAAGTAAATAGCGAGTGTTTTTCCCTCGTCGTTTTTTTTTGTGTGTGTGTGTGTGTGGGGGGGGAAAAAAGGTTTTCCCATAGACTTCAAATACTTGGCATTAATTTGCGGTTTTGTGGAATACTAGACAACGGGCAGTGGATGATCACACCCAAAGGGATGTGCATGGATAACTGTTTGATGTTTATTTGAAATGAAAGATGGTTTGTGTTTGGTGAAATTACGCCCAGCCCTCTCGCTCTGTCTATGACTTTAAAAAAAAAAAAAAAAAAAAAGAGCACAAGAGAGCATAGAAATCAAGTCTCTATTTTTCTCAACTCTCAAATTTTATATGAAGACAAAGTAATTGCTAGAAATTAGACCTTGTAGTGGGTAATGTGCCCATTAAATCTGTCCCCTTAATCAAAACAGAAAAAGTTCTGGTGGTTAGTGGCTGCTATTGAAGTGAAGATTTTTGTTTTTTCCTCGTGTTTGAACTCATGCCTTGTGTGGAGTGACTGTAAGTGTGTAGTTAATGAAGGTGGAGGATATATTCTTCATAGAAAAATCCATTGACCTGTTTTTGCACAGTATTTTTAGGTTTCGTTTTTGTCTTCTCTGTTTATTTCCGGTCTCTCCACACAATGTGGAGCTCCATTGCCTTAGACCAGACAAGCAGGAGGCTTTTGGCTGGACATCCTTGGCTGATGGGGGCTCTATACCAGCGTCGGGAGGACGGAGTGATGATGATGATGATGAGTGAGCATTTGGACGTAATATACTGCGTTCACAGACACTTTTTGCTCCTGAGAGACGTCATCAATGCAATGTCATACATGAAACTGATTCTCCATGATGTGCTGGGAGCACATGGACATTATCTGTGATCTGTTTGTATGTGACGTGTGTGTAAGGCTGTGAGAGTCTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71876 True 1479 lncRNA 0.36 1 4772221 4773699

Neighbor

gene id symbol gene type direction distance location
CI01000010_04753467_04770912 RNF11L2, RNF11B, RNF11 coding upstream 547 4753231 ~ 4771674 (+)
CI01000010_04735645_04749008 TTC39A coding upstream 22997 4735645 ~ 4749224 (+)
CI01000010_04696294_04717129 EPS15 coding upstream 54999 4696294 ~ 4717222 (+)
CI01000010_04686730_04692395 CALR coding upstream 79588 4686660 ~ 4692633 (+)
CI01000010_04640858_04683752 OSBPL9 coding upstream 88443 4640516 ~ 4683778 (+)
CI01000010_04803003_04849985 FAF1 coding downstream 29304 4803003 ~ 4849985 (+)
CI01000010_04871254_04873119 DMRTA2, DMRT5 coding downstream 96841 4870540 ~ 4873918 (+)
CI01000010_04934550_04955403 NA coding downstream 160157 4933856 ~ 4956630 (+)
CI01000010_05012978_05018219 NA coding downstream 237680 5011379 ~ 5018346 (+)
CI01000010_05047527_05065421 NA coding downstream 273828 5047527 ~ 5066870 (+)
G63058 NA non-coding upstream 181082 4590169 ~ 4591139 (+)
G63078 NA non-coding upstream 199727 4572277 ~ 4572494 (+)
G63070 NA non-coding upstream 214922 4556992 ~ 4557299 (+)
G63069 NA non-coding upstream 217240 4554752 ~ 4554981 (+)
G63056 NA non-coding upstream 219818 4552199 ~ 4552403 (+)
G63131 NA non-coding downstream 105325 4879024 ~ 4879521 (+)
G63134 NA non-coding downstream 127734 4901433 ~ 4901642 (+)
G63149 NA non-coding downstream 172766 4946465 ~ 4946668 (+)
G63151 NA non-coding downstream 179843 4953542 ~ 4953763 (+)
G62983 NA other upstream 322894 4448172 ~ 4449327 (+)
G62856 NA other upstream 832276 3937757 ~ 3939945 (+)
G62838 NA other upstream 878428 3890095 ~ 3893793 (+)
CI01000010_03320340_03346243 NA other upstream 1441035 3313695 ~ 3347796 (+)
G63403 NA other downstream 921746 5695445 ~ 5707085 (+)
G63405 NA other downstream 934272 5707971 ~ 5717250 (+)
CI01000010_05789479_05790006 NA other downstream 983254 5788332 ~ 5790204 (+)
G63524 NA other downstream 1600859 6374558 ~ 6374667 (+)
G63572 NA other downstream 1812229 6585928 ~ 6617806 (+)

Expression


Co-expression Network