eloa (tceb3)


Basic Information

Item Value
gene id eloa
gene name tceb3
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 29542748 ~ 29552884 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU272690
GTTTTAAGTATCAATCTAGTAACTGGGTATAAATTAAAATGCTTTGCTTTTGTTATTCCCTGACAGGTCGACAGGTAAAGATGGCATATGTAAATTCGGTTGCAAAGCCCCCTCGTGATGTCCGGAGGCGGCAGGAGAAGTTTGGCACTAAAAGTGGCTCTACCAGTGCCAGTGTTTCTGCTGCAGCTCCAACTCCAGTGAAaATCAGACCTCCAATGTCCTACAGTTCCCACAATCAGTCAAGTGAAGGTGGTCAGTCTTCCTTTAGCAGTCCTCCTGAGTCCTCTCGTTCTTCTGCTCCTAGCAGCAGTGCTGGCCCTAGTGCCAGAGACAAACCACAGGTCAAAAAAATTGCCCCTATGATGGCTAAAACTATCAAAGCATTTAAGAACAGATTCTCTCGACGGTAAAAACAGAAGAATGACTGGATTTCTGTTCTGGGAGAAAATGTGGAGTGTGAGAGTGTAAAGTCAAATCTCATTTTAATGTAAAGCCTCCTCTCCTCTTATGGTTTTATGCTTTTAGTTGTATTCATTTCTGATCACTGGAAGAAGGGGAAAAAATTACACACAAGCAAGCAGTGTTATGGCATGTAGGTATTTGTCACACTTTCGACACAATCACAATCTGTACAGTGGATCATTACACTACGAAGGGACAGTGAATTTTAGTGGCAGTTTAgccatatacatatttaattgcCGTTGCAAGCAAAGAATTCAGAAACTTTGCTCTTCATAAGATTAAATTCCCCATAGTAGTGAGGTTATGAAGATATGTTGTTTCTCAGCTTTATTTAATTCAGTCATGGATGTGCGTATGCTAATATGAATGGCAGTGAATGATGAAATCACCCATGAGAGGAGAGGGAGGGGAGGAATCAGTGAATGATCTGGACCCTACTTTCCCGCTtgactgtatttattttcagtCCATGGACATGGTTTCCTTAACTTGGCCCTGAATGAAACAGGATCAAAATAgtaattttaatagattttaataaatgttatatgtacatttttaataaactcaGCATTTGCCCtc
>TU272694
aATCAGACCTCCAATGTCCTACAGTTCCCACAATCAGTCAAGTGAAGGTGGTCAGTCTTCCTTTAGCAGTCCTCCTGAGTCCTCTCGTTCTTCTGCTCCTAGCAGCAGTGCTGGCCCTAGTGCCAGAGACAAACCACAGGTCAAAAAAATTGCCCCTATGATGGCTAAAACTATCAAAGCATTTAAGAACAGATTCTCTCGACGGTAAAAACAGAAGAATGACTGGATTTCTGTTCTGGGAGAAAATGTGGAGTGTGAGAGTGTAAAGTCAAATCTCATTTTAATGTAAAGCCTCCTCTCCTCTTATGGTTTTATGCTTTTAGTTGTATTCATTTCTGATCACTGGAAGAAGGGGAAAAAATTACACACAAGCAAGCAGTGTTATGGCATGTAGGTATTTGTCACACTTTCGACACAATCACAATCTGTACAGTGGATCATTACACTACGAAGGGACAGTGAATTTTAGTGGCAGTTTAgccatatacatatttaattgcCGTTGCAAGCAAAGAATTCAGAAACTTTGCTCTTCATAAGATTAAATTCCCCATAGTAGTGAGGTTATGAAGATATGTTGTTTCTCAGCTTTATTTAATTCAGTCATGGATGTGCGTATGCTAATATGAATGGCAGTGAATGATGAAATCACCCATGAGAGGAGAGGGAGGGGAGGAATCAGTGAATGATCTGGACCCTACTTTCCCGCTtgactgtatttattttcagtCCATGGACATGGTTTCCTTAACTTGGCCCTGAATGAAACAGGATCAAAATAgtaattttaatagattttaataaatgttatatgtacatttttaataaactcaGCATTTGCCCtc
>TU272696
aATCAGACCTCCAATGTCCTACAGTTCCCACAATCAGTCAAGTGAAGGTGGTCAGTCTTCCTTTAGCAGTCCTCCTGAGTCCTCTCGTTCTTCTGCTCCTAGCAGCAGTGCTGGCCCTAGTGCCAGAGACAAACCACAGGTCAAAAAAATTGCCCCTATGATGGCTAAAACTATCAAAGCATTTAAGAACAGATTCTCTCGACGGTAAAAACAGAAGAATGACTGGATTTCTGTTCTGGGAGAAAATGTGGAGTGTGAGAGTGTAAAGTCAAATCTCATTTTAATGTAAAGCCTCCTCTCCTCTTATGGTTTTATGCTTTTAGTTGTATTCATTTCTGATCACTGGAAGAAGGGGAAAAAATTACACACAAGCAAGCAGTGTTATGGCATGTAGGTATTTGTCACACTTTCGACACAATCACAATCTGTACAGTGGATCATTACACTACGAAGGGACAGTGAATTTTAGTGGCAGTTTAgccatatacatatttaattgcCGTTGCAAGCAAAGAATTCAGAAACTTTGCTCTTCATAAGATTAAATTCCCCATAGTAGTGAGGTTATGAAGATATGTTGTTTCTCAGCTTTATTTAATTCAGTCATGGATGTGCGTATGCTAATATGAATGGCAGTGAATGATGAAATCACCCATGAGAGGAGAGGGAGGGGAGGAATCAGTGAATGATCTGGACCCTACTTTCCCGCTtgactgtatttattttcagtCCATGGACATGGTTTCCTTAACTTGGCCCTGAATGAAACAGGATCAAAATAgtaattttaatagattttaataaatgttatatgtacatttttaataaactcaGCATTTGCCCtc
>TU272697
aATCAGACCTCCAATGTCCTACAGTTCCCACAATCAGTCAAGTGAAGGTGGTCAGTCTTCCTTTAGCAGTCCTCCTGAGTCCTCTCGTTCTTCTGCTCCTAGCAGCAGTGCTGGCCCTAGTGCCAGAGACAAACCACAGGTCAAAAAAATTGCCCCTATGATGGCTAAAACTATCAAAGCATTTAAGAACAGATTCTCTCGACGGTAAAAACAGAAGAATGACTGGATTTCTGTTCTGGGAGAAAATGTGGAGTGTGAGAGTGTAAAGTCAAATCTCATTTTAATGTAAAGCCTCCTCTCCTCTTATGGTTTTATGCTTTTAGTTGTATTCATTTCTGATCACTGGAAGAAGGGGAAAAAATTACACACAAGCAAGCAGTGTTATGGCATGTAGGTATTTGTCACACTTTCGACACAATCACAATCTGTACAGTGGATCATTACACTACGAAGGGACAGTGAATTTTAGTGGCAGTTTAgccatatacatatttaattgcCGTTGCAAGCAAAGAATTCAGAAACTTTGCTCTTCATAAGATTAAATTCCCCATAGTAGTGAGGTTATGAAGATATGTTGTTTCTCAGCTTTATTTAATTCAGTCATGGATGTGCGTATGCTAATATGAATGGCAGTGAATGATGAAATCACCCATGAGAGGAGAGGGAGGGGAGGAATCAGTGAATGATCTGGACCCTACTTTCCCGCTtgactgtatttattttcagtCCATGGACATGGTTTCCTTAACTTGGCCCTGAATGAAACAGGATCAAAATAgtaattttaatagattttaataaatgttatatgtacatttttaataaactcaGCATTTGCCCtc
>XM_022682871.1
ATGTGAACGGACCGTCCTCAGCAGCGCTGAAGCGGAGCGGCTTCCGGGCAGTATGTAGCAGCTGGGAAACATGGcggaggagctgctggaggcGGTGGAGAAGTTGCAGTCAAGGCTCTCAGAGAGCCAGGAGCCTCGGAAGCTTCTGAAGACACTCAAGAGGTTGGGGGAGCTGCCCATGACCGTGGACATCCTTGTGGAAACCGGTATTGGGAAGACTGTAAATTCTCTGCGCAAACATAATATTGCAGGGGAGGCAGCAAAGAACCTTGTGGCCAAGTGGAAGAAGCTGGTTCCCCAGTCTGGTGATAGACCCAGTAACCCAAGGGAGGGCCGTTCTCACTCACGGACAGACGATAACAGAGGGTACAGACACGCCAGGGAACCTTCACCAGAGGAGCCGCCACCTGTAGAGgaacaggaggaggaagaggtggaggtggaggaggaggaagaaggagaATATCAGCAATCCTACCATGAATCCCCTCCACAGCACTACAGCCCCCAGGACAGCAGGGCACACGAATATGAGTCAGAAGAGTATGAGAGCCCAGTAGAGGAACCGCCGCCTAGTCCTCCCCGGAAAGAAATCAAACACAGCAAGCTGCATAAGGAGTCCACAAGAGAACACAGCTCTCACACCTCCAGGGAACAGGAGAGACACAAGCAGTCTGCACAGACTTCAAGCAGTACCAGCAAGTCACGAATACGTAGTGATGAGAGAGAGCTAAAAGGTGGCTCTACACACACATCATCTAAACACAGTCGCCACTCCGGCCCACATGAAAGTAAACGAGAAAAGAAAGGAGTCAGTGATGGGAAGCCTAGGGAAAGAAAGGAGAAACCAGAGCCTTTGCAGGATGAAGAGGACGAACCTTTCGAGGCTCCCACTATGTCTTTTGAATCATTTCTTACCTATGACGAACCTTCCCctattaaaaagaagaagaaacctTCTCGACCACCTCCACCTGTCATCCCTGTCCCTTCAGTGTCCAAGTCCAGCAAATCCAATGGAACTCGCAGCAAACGGCCTGAGCCAGCTGTTCCGTCAGTGTCCTCATATACAGTGCCAGAGAAACGCAGAAAGGTAGTTGATGTGATGCCCACTCTCCCCGACATCTCTTTGCCAGCTATTCAACCCAACTACAGACCACTACCCTCGATAGATGTCACCCCGCTGTCCCCACAGAGACGTAAAgtCCCCGTATCATGTGAGGAAGAGGATGCTGGATTTACAGGACGGCGTTTCAACTCTAAAATGGTGGTTTACTCTGGCTCGAAGACTTCATACCTGCCCAAGATGATGACACTGTATGAACAGTGCATTAGAGTCTTGCAGAACAATATTGACTGTGAGTTGTGTGCTGAaATCAGACCTCCAATGTCCTACAGTTCCCACAATCAGTCAAGTGAAGGTGGTCAGTCTTCCTTTAGCAGTCCTCCTGAGTCCTCTCGTTCTTCTGCTCCTAGCAGCAGTGCTGGCCCTAGTGCCAGAGACAAACCACAGGTCAAAAtCCCCGTATCATGTGAGGAAGAGGATGCTGGATTTACAGGACGGCGTTTCAACTCTAAAATGGTGGTTTACTCTGGCTCGAAGACTTCATACCTGCCCAAGATGATGACACTaATCAGACCTCCAATGTCCTACAGTTCCCACAATCAGTCAAGTGAAGGTGGTCAGTCTTCCTTTAGCAGTCCTCCTGAGTCCTCTCGTTCTTCTGCTCCTAGCAGCAGTGCTGGCCCTAGTGCCAGAGACAAACCACAGGTCAAAAtCCCCGTATCATGTGAGGAAGAGGATGCTGGATTTACAGGACGGCGTTTCAACTCTAAAATGGTGGTTTACTCTGGCTCGAAGACTTCATACCTGCCCAAGATGATGACACTaATCAGACCTCCAATGTCCTACAGTTCCCACAATCAGTCAAGTGAAGGTGGTCAGTCTTCCTTTAGCAGTCCTCCTGAGTCCTCTCGTTCTTCTGCTCCTAGCAGCAGTGCTGGCCCTAGTGCCAGAGACAAACCACAGGTCAAAAtCCCCGTATCATGTGAGGAAGAGGATGCTGGATTTACAGGACGGCGTTTCAACTCTAAAATGGTGGTTTACTCTGGCTCGAAGACTTCATACCTGCCCAAGATGATGACACTaATCAGACCTCCAATGTCCTACAGTTCCCACAATCAGTCAAGTGAAGGTGGTCAGTCTTCCTTTAGCAGTCCTCCTGAGTCCTCTCGTTCTTCTGCTCCTAGCAGCAGTGCTGGCCCTAGTGCCAGAGACAAACCACAGGTCAAAAATTCCCTGACAGGTCGACAGGTAAAGATGGCATATGTAAATTCGGTTGCAAAGCCCCCTCGTGATGTCCGGAGGCGGCAGGAGAAGTTTGGCACTAAAAGTGGCTCTACCAGTGCCAGTGTTTCTGCTGCAGCTCCAACTCCAGTGAAaATCAGACCTCCAATGTCCTACAGTTCCCACAATCAGTCAAGTGAAGGTGGTCAGTCTTCCTTTAGCAGTCCTCCTGAGTCCTCTCGTTCTTCTGCTCCTAGCAGCAGTGCTGGCCCTAGTGCCAGAGACAAACCACAGGTCAAAAAAATTGCCCCTATGATGGCTAAAACTATCAAAGCATTTAAGAACAGATTCTCTCGACGGTAAAAACAGAAGAATGACTGGATTTCTGTTCTGGGAGAAAATGTGGAGTGTGAGAGTGTAAAGTCAAATCTCATTTTAATGTAAAGCCTCCTCTCCTCTTATGGTTTTATGCTTTTAGTTGTATTCATTTCTGATCACTGGAAGAAGGGGAAAAAATTACACACAAGCAAGCAGTGTTATGGCATGTAGGTATTTGTCACACTTTCGACACAATCACAATCTGTACAGTGGATCATTACACTACGAAGGGACAGTGAATTTTAGTGGCAGTTTAgccatatacatatttaattgcCGTTGCAAGCAAAGAATTCAGAAACTTTGCTCTTCATAAGATTAAATTCCCCATAGTAGTGAGGTTATGAAGATATGTTGTTTCTCAGCTTTATTTAATTCAGTCATGGATGTGCGTATGCTAATATGAATGGCAGTGAATGATGAAATCACCCATGAGAGGAGAGGGAGGGGAGGAATCAGTGAATGATCTGGACCCTACTTTCCCGCTtgactgtatttattttcagtCCATGGACATGGTTTCCTTAACTTGGCCCTGAATGAAACAGGATCAAAATAgtaattttaatagattttaataaatgttatatgtacatttttaataaactcaGCATTTGCCCtca

Function

symbol description
tceb3 elongin-A

NR:

description
PREDICTED: transcription elongation factor B polypeptide 3 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU272690 False 1047 TUCP 0.40 3 29551136 29552883
TU272694 False 845 lncRNA 0.39 3 29549314 29552883
TU272696 False 845 lncRNA 0.39 3 29549314 29552883
TU272697 False 845 lncRNA 0.39 3 29549314 29552883
XM_022682871.1 True 3288 mRNA 0.48 17 29542748 29552884

Neighbor

gene id symbol gene type direction distance location
rpl11 rpl11 coding upstream 18878 29519533 ~ 29523870 (+)
LOC103045125 NA coding upstream 25288 29511703 ~ 29517460 (+)
LOC103044302 eef1a1l2,LOC103044302,LOC108426655,LOC108256978,LOC108426629,LOC103044018,LOC107589444 coding upstream 35395 29500361 ~ 29507353 (+)
LOC103044018 eef1a1l1,LOC103044018,LOC108426629,LOC100526699 coding upstream 42645 29496100 ~ 29500103 (+)
LOC103043706 NA coding upstream 59007 29479125 ~ 29483741 (+)
pithd1 pithd1,LOC107654704 coding downstream 1352 29554236 ~ 29557533 (+)
LOC103046858 ankib1,LOC107742824,LOC107706216,LOC107654707,LOC107696581 coding downstream 17194 29570078 ~ 29600164 (+)
gatad1 gatad1,LOC102800149 coding downstream 48983 29601867 ~ 29604753 (+)
LOC103021940 LOC108426757 coding downstream 54185 29607069 ~ 29625468 (+)
LOC103021391 lrrc14b,LOC103021391 coding downstream 73403 29626287 ~ 29636049 (+)
G200785 NA non-coding upstream 57062 29484940 ~ 29485686 (+)
G200780 ppt1,LOC107697049,LOC107706207,LOC107589449,LOC107591677 non-coding upstream 75221 29462161 ~ 29467527 (+)
G200628 NA non-coding upstream 523651 29018573 ~ 29019097 (+)
G200511 NA non-coding upstream 760714 28770134 ~ 28782034 (+)
G200490 LOC108426231,LOC107706181,LOC107593552,LOC108257175,LOC107742858,LOC107669520 non-coding upstream 804422 28736851 ~ 28738326 (+)
G200799 NA non-coding downstream 40136 29593020 ~ 29593537 (+)
G200803 LOC108426791,LOC101073009,LOC107696579,LOC107591646,LOC101165157 non-coding downstream 83237 29636121 ~ 29640007 (+)
LOC111195537 NA non-coding downstream 121902 29674786 ~ 29744233 (+)
G200840 NA non-coding downstream 320626 29873510 ~ 29878401 (+)
G200864 NA non-coding downstream 796481 30349365 ~ 30393273 (+)
G200341 LOC108426039 other upstream 1346550 28193574 ~ 28196198 (+)
LOC103032101 NA other upstream 1554853 27978282 ~ 27987895 (+)
G200235 NA other upstream 1724098 27815336 ~ 27818650 (+)
dync1i1 dync1i1,LOC107731605 other upstream 1802639 27634679 ~ 27740109 (+)
LOC103023645 gngt1,LOC103023645,LOC108257427,LOC103152523,LOC103362787,LOC107085869 other upstream 2237162 27304521 ~ 27305586 (+)
rbm24 rbm24,rbm24a,LOC107754275,LOC107592929 other downstream 1457042 31009926 ~ 31084633 (+)
G201018 NA other downstream 1459827 31012711 ~ 31015045 (+)
G201207 NA other downstream 2389318 31942202 ~ 31987057 (+)
tpmt tpmt other downstream 2500831 32053715 ~ 32067640 (+)
LOC103043810 ago4,LOC106511154,LOC103043810 other downstream 2716414 32269298 ~ 32287803 (+)

Expression


Co-expression Network