Gene
RNA
| Item | Value |
|---|---|
| gene id | G200864 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035919.1 |
| NCBI id | CM008322.1 |
| chromosome length | 38085671 |
| location | 30349365 ~ 30393273 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU272778 | True | 396 | lncRNA | 0.46 | 3 | 30349365 | 30393273 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC111195487 | NA | coding | upstream | 99510 | 30248587 ~ 30249855 (+) |
| LOC103022546 | NA | coding | upstream | 696544 | 29646768 ~ 29652821 (+) |
| LOC103021391 | lrrc14b,LOC103021391 | coding | upstream | 713316 | 29626287 ~ 29636049 (+) |
| LOC103021940 | LOC108426757 | coding | upstream | 723897 | 29607069 ~ 29625468 (+) |
| gatad1 | gatad1,LOC102800149 | coding | upstream | 744612 | 29601867 ~ 29604753 (+) |
| utp23 | utp23 | coding | downstream | 578130 | 30971403 ~ 30974511 (+) |
| aard | LOC108424810 | coding | downstream | 585477 | 30978750 ~ 30985844 (+) |
| stmnd1 | NA | coding | downstream | 662747 | 31056020 ~ 31062482 (+) |
| cap2 | cap2,LOC107706226 | coding | downstream | 704626 | 31097899 ~ 31133970 (+) |
| vps28 | vps28,LOC107592928,LOC107696523 | coding | downstream | 748565 | 31141838 ~ 31149221 (+) |
| G200840 | NA | non-coding | upstream | 470964 | 29873510 ~ 29878401 (+) |
| LOC111195537 | NA | non-coding | upstream | 605132 | 29674786 ~ 29744233 (+) |
| G200803 | LOC108426791,LOC101073009,LOC107696579,LOC107591646,LOC101165157 | non-coding | upstream | 709358 | 29636121 ~ 29640007 (+) |
| G200799 | NA | non-coding | upstream | 755828 | 29593020 ~ 29593537 (+) |
| G200785 | NA | non-coding | upstream | 863679 | 29484940 ~ 29485686 (+) |
| G200869 | NA | non-coding | downstream | 6973 | 30400246 ~ 30400752 (+) |
| G200971 | trps1 | non-coding | downstream | 91385 | 30484658 ~ 30488504 (+) |
| G201004 | NA | non-coding | downstream | 347405 | 30740678 ~ 30740930 (+) |
| G201006 | NA | non-coding | downstream | 349486 | 30742759 ~ 30743450 (+) |
| G201008 | NA | non-coding | downstream | 354730 | 30748003 ~ 30748202 (+) |
| lypla2 | lypla2,lypa2 | other | upstream | 781290 | 29528063 ~ 29568075 (+) |
| eloa | tceb3 | other | upstream | 796481 | 29542748 ~ 29552884 (+) |
| G200341 | LOC108426039 | other | upstream | 2153167 | 28193574 ~ 28196198 (+) |
| LOC103032101 | NA | other | upstream | 2361470 | 27978282 ~ 27987895 (+) |
| G200235 | NA | other | upstream | 2530715 | 27815336 ~ 27818650 (+) |
| rbm24 | rbm24,rbm24a,LOC107754275,LOC107592929 | other | downstream | 616653 | 31009926 ~ 31084633 (+) |
| G201018 | NA | other | downstream | 619438 | 31012711 ~ 31015045 (+) |
| G201207 | NA | other | downstream | 1548929 | 31942202 ~ 31987057 (+) |
| tpmt | tpmt | other | downstream | 1660442 | 32053715 ~ 32067640 (+) |
| LOC103043810 | ago4,LOC106511154,LOC103043810 | other | downstream | 1876025 | 32269298 ~ 32287803 (+) |
