Gene
RNA
| Item | Value |
|---|---|
| gene id | G201008 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035919.1 |
| NCBI id | CM008322.1 |
| chromosome length | 38085671 |
| location | 30748003 ~ 30748202 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU272986 | True | 200 | lncRNA | 0.27 | 1 | 30748003 | 30748202 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC111195487 | NA | coding | upstream | 498148 | 30248587 ~ 30249855 (+) |
| LOC103022546 | NA | coding | upstream | 1095182 | 29646768 ~ 29652821 (+) |
| LOC103021391 | lrrc14b,LOC103021391 | coding | upstream | 1111954 | 29626287 ~ 29636049 (+) |
| LOC103021940 | LOC108426757 | coding | upstream | 1122535 | 29607069 ~ 29625468 (+) |
| gatad1 | gatad1,LOC102800149 | coding | upstream | 1143250 | 29601867 ~ 29604753 (+) |
| utp23 | utp23 | coding | downstream | 223201 | 30971403 ~ 30974511 (+) |
| aard | LOC108424810 | coding | downstream | 230548 | 30978750 ~ 30985844 (+) |
| stmnd1 | NA | coding | downstream | 307818 | 31056020 ~ 31062482 (+) |
| cap2 | cap2,LOC107706226 | coding | downstream | 349697 | 31097899 ~ 31133970 (+) |
| vps28 | vps28,LOC107592928,LOC107696523 | coding | downstream | 393636 | 31141838 ~ 31149221 (+) |
| G201006 | NA | non-coding | upstream | 4553 | 30742759 ~ 30743450 (+) |
| G201004 | NA | non-coding | upstream | 7073 | 30740678 ~ 30740930 (+) |
| G200971 | trps1 | non-coding | upstream | 259499 | 30484658 ~ 30488504 (+) |
| G200869 | NA | non-coding | upstream | 347251 | 30400246 ~ 30400752 (+) |
| G200864 | NA | non-coding | upstream | 354730 | 30349365 ~ 30393273 (+) |
| G201010 | NA | non-coding | downstream | 61793 | 30809995 ~ 30810226 (+) |
| G201030 | NA | non-coding | downstream | 257430 | 31005632 ~ 31005925 (+) |
| G201019 | nup153,LOC107706220 | non-coding | downstream | 270402 | 31018604 ~ 31029889 (+) |
| G201135 | NA | non-coding | downstream | 511743 | 31259945 ~ 31262960 (+) |
| G201163 | NA | non-coding | downstream | 693243 | 31441445 ~ 31451756 (+) |
| lypla2 | lypla2,lypa2 | other | upstream | 1179928 | 29528063 ~ 29568075 (+) |
| eloa | tceb3 | other | upstream | 1195119 | 29542748 ~ 29552884 (+) |
| G200341 | LOC108426039 | other | upstream | 2551805 | 28193574 ~ 28196198 (+) |
| LOC103032101 | NA | other | upstream | 2760108 | 27978282 ~ 27987895 (+) |
| G200235 | NA | other | upstream | 2929353 | 27815336 ~ 27818650 (+) |
| rbm24 | rbm24,rbm24a,LOC107754275,LOC107592929 | other | downstream | 261724 | 31009926 ~ 31084633 (+) |
| G201018 | NA | other | downstream | 264509 | 31012711 ~ 31015045 (+) |
| G201207 | NA | other | downstream | 1194000 | 31942202 ~ 31987057 (+) |
| tpmt | tpmt | other | downstream | 1305513 | 32053715 ~ 32067640 (+) |
| LOC103043810 | ago4,LOC106511154,LOC103043810 | other | downstream | 1521096 | 32269298 ~ 32287803 (+) |
