G201207


Basic Information

Item Value
gene id G201207
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 31942202 ~ 31987057 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU273238
tttgcttgtttgtttgtTTTCCAGTGCCTTCCTTTGTTCACCTCCAGCTGAGCTACATAATGTTTGAGGCCTGGAAAGTCACTCAAGAGGGGGTTGGCAACAGCTTGGTACAACGAGAAGACGAGGaagtgagaggagtgaacgtGTGTGGAGTTCATTAGGGAGGAGCGTGCCTTCATGACCTGTGGAGTTCATATGGATCTGCACGGTGGGGGAGTGGGGGGGAGGTGAGGAACAAAAACAGACGGTTACTTACTGGCCTTCATATGATCAGCACCAGAAGGTAAACAAGAGTTGGAGAATACTCCACATCCTGGACCTCCAAGAGAGCCTGGAGCCCAAGAGGTTCGACAAGATCCATTTTGGACATGTAATAAACCaggccttttttttgtttggcctGAATCAGCGCAGACAGGAAACGCATACCTTTCTCAAAAGGAGCCTCAGAGCATTTGTCAAAAGGACACTTACATGTCTGATGGCATACGCTGAGCCATATGCGAAAACCACGCATCAACTGGGTCTCGGCATCAAAATCAGACCTCAGGACGTGTGGACAGCTCAGCCTAAGCAAAGCCCAAAGAACGTATGCTGTACAGTGAGTCACCTCACTATAGTCTAAATTTCCAGATGATATCTTAGATCTCTTAGACTAAACGCTCCACCAAGCTGACATCAGCGATCCTCTTTACAGGCGAGTGAGGTTTTCTGTAATACACGTATTCTATTTCCTCCTCACCACAGACGTGACTTAAACGTGTCGGAACATAGAGCAAGTATTTTCCATCCGCAGGGAACAAACCCCATCCCTCTCCACTGAACCTCAAGGCGAAACTGCAATGGACACAAGCATCACAGGTGGAAGCCATGATAACAGAAGCTGAGAGACAGTATTGGGACAGTATCACTGAGCTAAAAACAAAGAGGTGGGTCAGCTGGGTTAAGGGGGTGGGCAACAATTTGTATGGATTGTATGCACGACTCCATATAGCTTAAACTGACAAGCACCGACAAGTACCATAAGAGATCagattaaagtaaattatacaACCTATCCAGCTTTATGTGGATacatttttgctattttgttaTATCTCTCACTTATACActcactgacatgccaaaagttgcTAAAGTTACCTCAAAGGATGATTGGGGAACATCCACACCAATGTAAGTTAACTATGGGAGTAGGagcaaggcctgatagtggaGTCAGATGGATACGACACTCCATCTCCAAAGTTGTGtgagcatttaacattcctcaattcGATTCACAGTGTGACGTGTGTATTAGGtgggaatacatcataaaaGGTAACGTTACTGCTCACAGTAGACAgaacagtgggtggtaatgatcgtggcCAGTGGCATCTGACTAAAACTGCCCATGTGAACAATTAGCAAGTGATTCTGTCAggaatcacatccacattcaatgcaacagaccccaaacacacatatactagttcccatcccatgacttttgacatgtcagtgtCCAAGTCCAATGACCAGCTAAGCATAAAGAGACATATGAAGCTAAATACAAAGCTTACATATGCAGCTAACGCTATGCAAAGAAACCACAATTCCATTGTAAAATTTCACAAGACCATGTTGATGTGAgagcttaataataataataataataataatgatagttctaataattgtaataatagtaataataacaataataaacattgtAACTTTAAGGGAGAACATTTACATTGATGGCGAAATGTTGTTAATCCAGAGACAAAAAGAGCTCATTGAAATCTACAGAAAGGCATTTTTAAACACCAGAGAAAagataaattaatgaaatacaCTTTTAAGATCAACATCAGACATGCTAAGACAAAATAAtgatgaaaatgaaaacaggATCGATACAGAACAATTATATTCAATTATTTCcactttaaattgttttttttttctttacaaatacATACTGCTACAGTTAAAAAGTAGTCAGCGACTAAAAACAGCTCCTTTGACAGAAGACAGATGCAGATTCCTCACCTTTACAGATTGTGGTTTTTGTcttttcagccttttttttttttcaaaataatacacaataaaagtttaaatacaCGGAGATTTACTGCAAAATGAGCATTGCTTggcttttcattaaaaaaagagtgaaagaaaaaggACTTAATGACAATACTCTACGCAAAAGCTTTCCTTTATGTTATTTATGTTCCTCAAATGTAGTTTTCGCtttcttttaaatctttatgtGAATGTATTCGTTGTCGTCGTCGTCGTCTTCGATATGAGACTGTCATCGTGGTTGGTGAAGCTTGGCTTACGAGACTGGGGGAGAGGGGAGGCGGGGCTGAGGGAGGGTCTATGCATAAAACTCCTTGGTGGGAGCCTTCTGATAGGCTGCTCCGGAGGGCTTCCTTTCTCCGAGATCGTAGCTGCCTTCATCCTTCTTCCTCATGCGGTACACCAacaggaggatgaggaagatgGCGAAGAGGAAGCCAATAACTCCACCTGCGATGACAGCTGCGAGAcaagataataaagaaaacaaaggaGAGGTTAGAGGCAGCTCTGTGTGAACTAGGGGTTTAAGATATGGTCCAAAAAATCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU273238 True 2629 TUCP 0.41 2 31942202 31987057

Neighbor

gene id symbol gene type direction distance location
trnaq-cug_20 NA coding upstream 510227 31431904 ~ 31431975 (+)
trnaq-cug_19 NA coding upstream 510560 31431571 ~ 31431642 (+)
trnaq-cug_18 NA coding upstream 510890 31431241 ~ 31431312 (+)
trnar-acg_20 NA coding upstream 511179 31430951 ~ 31431023 (+)
trnaq-uug_6 NA coding upstream 511584 31430547 ~ 31430618 (+)
LOC103047171 ext1,ext1c,LOC107592945,LOC107706241,LOC107654729,LOC107688378,LOC107754264 coding downstream 84588 32071645 ~ 32180536 (+)
ncdn NA coding downstream 200100 32187157 ~ 32193783 (+)
tfap2e tfap2e coding downstream 209158 32196215 ~ 32211930 (+)
LOC103044735 LOC108430542,LOC107591984,LOC108257069,LOC107654683,LOC107592950,LOC107754258 coding downstream 305122 32292179 ~ 32295555 (+)
cdca8 cdca8 coding downstream 313317 32300374 ~ 32304369 (+)
G201206 NA non-coding upstream 2262 31939501 ~ 31939940 (+)
G201167 NA non-coding upstream 310449 31548349 ~ 31631753 (+)
G201163 NA non-coding upstream 490446 31441445 ~ 31451756 (+)
G201135 NA non-coding upstream 679242 31259945 ~ 31262960 (+)
G201019 nup153,LOC107706220 non-coding upstream 912313 31018604 ~ 31029889 (+)
G201225 NA non-coding downstream 26021 32013078 ~ 32065707 (+)
G201281 LOC108430540,LOC102218321,LOC103154989,LOC108257141,LOC103371078,LOC103461361 non-coding downstream 194638 32181695 ~ 32186335 (+)
G201289 psmb2,LOC107591978,LOC107592948,LOC107688376 non-coding downstream 230077 32217134 ~ 32228952 (+)
G201287 NA non-coding downstream 267432 32254489 ~ 32260203 (+)
G201308 LOC108430568,LOC107567795 non-coding downstream 328178 32315235 ~ 32323517 (+)
rbm24 rbm24,rbm24a,LOC107754275,LOC107592929 other upstream 857569 31009926 ~ 31084633 (+)
G201018 NA other upstream 927157 31012711 ~ 31015045 (+)
lypla2 lypla2,lypa2 other upstream 2374127 29528063 ~ 29568075 (+)
eloa tceb3 other upstream 2389318 29542748 ~ 29552884 (+)
G200341 LOC108426039 other upstream 3746004 28193574 ~ 28196198 (+)
tpmt tpmt other downstream 66658 32053715 ~ 32067640 (+)
LOC103043810 ago4,LOC106511154,LOC103043810 other downstream 282241 32269298 ~ 32287803 (+)
G201445 flii,LOC107581766,LOC107737969,LOC107703428,LOC107674686 other downstream 936471 32923528 ~ 32927919 (+)
bud31 bud31,LOC107737741,LOC107720055 other downstream 987263 32974320 ~ 32977910 (+)
G201466 LOC102799139,LOC107581721 other downstream 1273116 33260173 ~ 33274907 (+)

Expression


Co-expression Network