G201445 (flii,LOC107581766,LOC107737969,LOC107703428,LOC107674686)


Basic Information

Item Value
gene id G201445
gene name flii,LOC107581766,LOC107737969,LOC107703428,LOC107674686
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 32923528 ~ 32927919 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU273558
CCTTGTAGAGTTTAGGTCGAACTGGAGAAAAGTCATCTGGAACATGTTTCTTAATTTCCTCAGGTTGTCCCCCAAGAACTTCCCAAAATTCAGGTGGTTCCTGATTTTGCATCAGTGTAGTAATCTCTGCTTTGCCCTTCCTCTCATTCTTGTTTATCTTCTCTGCAAACAGCctggCTTTTGTAGTGCCACTGAGAGTGGCATTGGCTCCCCTCCACACATAGATATCAAGTCCAGTATCCAGCAAGAACACAAATCGTGGATCGAGGGAGGATGCCTTCAGAGGTACAGACTCCAATCTGATGTTCTTCTTCCCATAAACACGGTAAAGCCTGGTACAGTATTGTGAATCTTCCACAGTGTAGAATCCACTTGCAGTTCCACCTTCAATGTAGGAGATTTCATTGTCAAACACTGCACTAAATTCTTCACTTTCATCTCCCATTTCCTCTCTGATAGTCCTGCACTCAGCACCCAGGTAATTGCGAAGATTAACAGCGTGGATAGCAGAGCCTGCCTTCTTATCCAAGGTAGCTTCCTGACCAATCCAGTAAAAGATGTGCCAGTTCAAGGCCCCATTGTCATCTAGAAAAGTCTTTAGGATGATGTAACAGTCTGCCTCGTAGAACTTCCCATGGAAAGTCTCATCCACTTGCACAGGCAAAAAGTTCTCTATCTGCCACACACTGACACCAGGAATGTGTCCCACATCTTCTGTAAAAATCTCAGAATAGTCAAGCGGAGGCTTCTCGAGGTTCTTGTCCCATCGCTTGGACTTCAGATCAGAGTATTTCAAATCTCCATTCTCCTCAATGGACTTGTTCTTTTCCTGGGCCACATCAGACATGCCTTTCAGAACTTGTTTAGCCTGGTCATCCTGTGCCGAATCCTTCCTTCGCCTTAACCTCATCTTTCTGGCCATTGGATCCCTTGGACTGTTGCCTCCACCAGCTGCAGCCACGGTGGCTGGTGACGCTCCTGCTAATCGCAGTTGGTTCTGCAGGGAGAAGTCTATGTTGTACCACTCGGCTGCTCTGTCCACAGGCTTGGGGGGCATAACCAGGTTTGGATTCTCTCTAACATCTAAAACTTGTAAATCAGAGAGGAAATGGATGGCCTCTGGTAAAGTAACCAGACGATTTTTATTCAACACCAGCTTCTTCAATTTCCCACACCTGCAAAGCCCCTCTGGAATCAGCTCCAGATTATTGTTGGCTGCCATGAACTCCACCAAGTTGGACAGCTTCCCAACACCAGATGGCACGCCATCAAAGTCAAGTTTGTTCGAGTTCAAATACAGCTTTTTTAGTTTGGACAGCTTGCAAATAGCAGA

Function

symbol description
flii Predicted to enable actin filament binding activity and phosphatidylinositol-4,5-bisphosphate binding activity. Acts upstream of or within sarcomere organization. Predicted to be active in actin cytoskeleton; cytoplasm; and nucleus. Is expressed in myotome. Orthologous to human FLII (FLII actin remodeling protein).

NR:

description
PREDICTED: protein flightless-1 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU273558 True 1333 TUCP 0.46 10 32923528 32927919

Neighbor

gene id symbol gene type direction distance location
syngr3 syngr3,LOC107581789,LOC107703346,LOC107720048,LOC107674602,LOC107591648 coding upstream 32647 32884727 ~ 32890881 (+)
gfer gfer,LOC102797077 coding upstream 39366 32880440 ~ 32884162 (+)
ccdc97 NA coding upstream 194502 32720186 ~ 32729026 (+)
LOC103038138 cacna1h,LOC108430574,LOC107703431,LOC106951959,LOC103151816,LOC102299227,LOC106914544 coding upstream 208086 32541727 ~ 32715442 (+)
epn2 epn2,LOC104959799 coding upstream 444815 32445620 ~ 32478713 (+)
smcr8 smcr8 coding downstream 20262 32948181 ~ 32957634 (+)
cpsf4 cpsf4 coding downstream 51037 32978956 ~ 32985367 (+)
slc29a4 slc29a4,LOC108430547,LOC107720057,LOC107581724,LOC107737679,LOC107703421 coding downstream 78198 33006117 ~ 33032722 (+)
tnrc18 tnrc18 coding downstream 171527 33099446 ~ 33218836 (+)
LOC103025781 fscn1,fscn1a,LOC107581720,LOC107742378,LOC107674660,LOC107720060 coding downstream 406807 33334726 ~ 33348668 (+)
G201444 flii,LOC107703428,LOC107674686 non-coding upstream 96 32915172 ~ 32923432 (+)
G201442 znf598 non-coding upstream 16511 32904382 ~ 32907017 (+)
G201414 NA non-coding upstream 24773 32895178 ~ 32898755 (+)
G201409 NA non-coding upstream 192780 32729200 ~ 32730748 (+)
G201393 NA non-coding upstream 435695 32487519 ~ 32487833 (+)
G201448 top3a,LOC107703423,LOC107737704,LOC107720051,LOC107592418 non-coding downstream 15866 32943785 ~ 32947042 (+)
G201451 shmt1,LOC107737723,LOC107703425,LOC107581728,LOC107674655 non-coding downstream 35492 32963411 ~ 32964559 (+)
G201453 NA non-coding downstream 41698 32969617 ~ 33055469 (+)
G201454 NA non-coding downstream 43367 32971286 ~ 32972726 (+)
G201457 atp5j2,LOC107720056,LOC107591715,LOC107703422,LOC107737688,LOC107674607,LOC107578700 non-coding downstream 59226 32987145 ~ 32987971 (+)
LOC103043810 ago4,LOC106511154,LOC103043810 other upstream 635725 32269298 ~ 32287803 (+)
tpmt tpmt other upstream 855888 32053715 ~ 32067640 (+)
G201207 NA other upstream 936471 31942202 ~ 31987057 (+)
rbm24 rbm24,rbm24a,LOC107754275,LOC107592929 other upstream 1838895 31009926 ~ 31084633 (+)
G201018 NA other upstream 1908483 31012711 ~ 31015045 (+)
bud31 bud31,LOC107737741,LOC107720055 other downstream 46401 32974320 ~ 32977910 (+)
G201466 LOC102799139,LOC107581721 other downstream 332254 33260173 ~ 33274907 (+)
psmg3 psmg3 other downstream 883513 33811432 ~ 33814986 (+)
LOC111195488 NA other downstream 2178119 35106038 ~ 35124618 (+)
G202336 NA other downstream 3661529 36589448 ~ 36940279 (+)

Expression


Co-expression Network