G63359


Basic Information

Item Value
gene id G63359
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 5570171 ~ 5579186 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU72160
CAACCCTGTTCCATTCCCAATAAACACTCAGGCTTCAATGGCCGGTGGTCTTAGTAGGATACAACTTCCTTGAACTGATGACATGATCTCAGTGAAGATTCTTTGTCCTTTAAATGTTTGGGAGAAATGGCCAATGAATCATGGGTTTAAGAATGAAAGTGATCAGTCTGACTCCGGAGGAGCCGGAACAGGAAACCATATGGAAAAGGCCTCAGGAGAGGTCGTTACATAAAGTATTACTTTATGATCTTACAGTCCAAGTTCCTGTCAGTGGCATTGGTCCATGAAAGCGAGGGAGATTGTGAGAAAGAGAGAAAAAGAGACCACTGTATAGCGAAGGCTCACAAGACGCACCCGGCAATCACATGCCTCACTGAGCCATCGGATTTTATGAAAAATATCTTAATTTGTGTTCCGAAGATGAACGAAGATCATACAGATGTGGAATGACATAAGGATCCTCTTCCGTGAGCACCAGGAAAAACAGAGCTTCAAACATCCGCAATCACTTAAACCTCCAGCACGCTGGGTGAGGCAAGGAAATGTTTCCTTCCTTCAATGAAGATGAGGATAAGGACACATAATGGACAACAAGGAAATCTTTTCAAGTAATCTTTAATGATTAAGAACACCGCTATCACTTTATCTCCGTTTAAAGGTGCAGTGTGTCATTTCTGCGACGTTAGCGCCAAACAGGCTTCCCAAACACTAAAACCCACATATCCTGCCCGCCCCCATCTTCCATTGTTCAGATCAAAAGGTAGTCAAGAAATGCATGCCACTGGCTAAGGCAGAAGCTCAAACAGTAGAACATGGCGCTAGAAACACCAAGGTCATGGTTTCGATTCCCATTAATGCTGTTAAAAATGTGTGTACCTTGAATACAACGCAGGTCGCTTTGGATAAAAGCATCTACTAAATGCATAAATGTAAATGTTGGTTGGTTCAAATAAACAAAGAGCAATGTTTTGAAAGCATCACAGTGTTTACACCCCTCCGGAAAGTCAACATACAAATGGTTTACTTATAGCTGTCCCTGCATAGTATTTCAACACTCAAAAATGGTTTAGCAGCCAAACAGAAAATATCAGACAATCTTAAATCAAACCAAGTGATTCACACCACCACATCCACAACTAATTTTAACTTCAACCTTAAAGGAACACGCCACTATTTTTGAAAATAGGCTCATTTTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU72160 True 1198 lncRNA 0.41 3 5570171 5579186

Neighbor

gene id symbol gene type direction distance location
CI01000010_05523602_05535371 BCAR3 coding upstream 34479 5523516 ~ 5535692 (+)
CI01000010_05494740_05504597 NA coding upstream 64910 5493967 ~ 5505261 (+)
CI01000010_05477048_05482911 NA coding upstream 86870 5476525 ~ 5483301 (+)
CI01000010_05414058_05426498 NA coding upstream 143484 5414058 ~ 5426687 (+)
CI01000010_05359191_05385419 NA coding upstream 184487 5359191 ~ 5385684 (+)
CI01000010_05789479_05790006 NA coding downstream 209146 5788332 ~ 5790204 (+)
CI01000010_05819188_05855120 CEP350 coding downstream 240002 5819188 ~ 5855163 (+)
CI01000010_05859214_05887437 NA coding downstream 280028 5859214 ~ 5888267 (+)
CI01000010_05902969_05911426 LHX4 coding downstream 323783 5902969 ~ 5912165 (+)
CI01000010_06014142_06037829 XPR1A coding downstream 434956 6014142 ~ 6038450 (+)
CI01000010_05012978_05018219 NA non-coding upstream 552048 5011379 ~ 5018346 (+)
CI01000010_04934550_04955403 NA non-coding upstream 571096 4933856 ~ 4956630 (+)
G63162 NA non-coding upstream 577681 4983616 ~ 4992490 (+)
G63151 NA non-coding upstream 616408 4953542 ~ 4953763 (+)
G63149 NA non-coding upstream 623503 4946465 ~ 4946668 (+)
G63328 NA non-coding downstream 12190 5591376 ~ 5591852 (+)
G63332 NA non-coding downstream 55001 5634187 ~ 5638232 (+)
G63384 NA non-coding downstream 63691 5642877 ~ 5643077 (+)
G63386 NA non-coding downstream 65470 5644656 ~ 5645797 (+)
G63390 NA non-coding downstream 80033 5659219 ~ 5659439 (+)
CI01000010_04640858_04683752 OSBPL9 other upstream 916178 4640516 ~ 4683778 (+)
G62983 NA other upstream 1120844 4448172 ~ 4449327 (+)
G62856 NA other upstream 1630226 3937757 ~ 3939945 (+)
G62838 NA other upstream 1676378 3890095 ~ 3893793 (+)
CI01000010_03320340_03346243 NA other upstream 2238985 3313695 ~ 3347796 (+)
G63403 NA other downstream 116259 5695445 ~ 5707085 (+)
G63405 NA other downstream 128785 5707971 ~ 5717250 (+)
G63524 NA other downstream 795372 6374558 ~ 6374667 (+)
G63572 NA other downstream 1006742 6585928 ~ 6617806 (+)

Expression


Co-expression Network