G63386


Basic Information

Item Value
gene id G63386
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 5644656 ~ 5645797 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU72189
TTAACATGTTGGCAGACATTAAAATATGAGAAACATTCTAATCACAAAGCATGCAGTAATTTTTGAGCAGATTAAATTATACGTCTGTACAATTCCGTCCCACTGACTTTTGGCCCTGATTGACCCTTGACTCCTTTTCCCCCTGGAGGTCCTGAAGATCCTGGTTTTCCCTTCAGACCATGAGGACCCCTAGCTCCTGGCTGACCCACTGAACCCATTTTGCCTCTTGTTCCAGGCTCTCCTTTCTTCCCGCTTGGGCCTTGAATACCAATTGATCCTATCTTCCCAGGGCCCCCTGAATTCCCTTTAAATCCAGGCTCTCCTTTAAGCCCATGCTTTCCACTTTGTCCAACAAATCCTTCTTTTCCTGGCAAACCCGGTAATCCAACAGCACCATTTGGACCTGGAGACCCATTTGTTCCTGCCTCACCAACAAGTCCACGTAGACCTTTGTCGCCCTTATCACCAGCTTCTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU72189 True 477 lncRNA 0.48 6 5644656 5645797

Neighbor

gene id symbol gene type direction distance location
CI01000010_05523602_05535371 BCAR3 coding upstream 108964 5523516 ~ 5535692 (+)
CI01000010_05494740_05504597 NA coding upstream 139395 5493967 ~ 5505261 (+)
CI01000010_05477048_05482911 NA coding upstream 161355 5476525 ~ 5483301 (+)
CI01000010_05414058_05426498 NA coding upstream 217969 5414058 ~ 5426687 (+)
CI01000010_05359191_05385419 NA coding upstream 258972 5359191 ~ 5385684 (+)
CI01000010_05789479_05790006 NA coding downstream 142535 5788332 ~ 5790204 (+)
CI01000010_05819188_05855120 CEP350 coding downstream 173391 5819188 ~ 5855163 (+)
CI01000010_05859214_05887437 NA coding downstream 213417 5859214 ~ 5888267 (+)
CI01000010_05902969_05911426 LHX4 coding downstream 257172 5902969 ~ 5912165 (+)
CI01000010_06014142_06037829 XPR1A coding downstream 368345 6014142 ~ 6038450 (+)
G63384 NA non-coding upstream 1579 5642877 ~ 5643077 (+)
G63332 NA non-coding upstream 6424 5634187 ~ 5638232 (+)
G63328 NA non-coding upstream 52804 5591376 ~ 5591852 (+)
G63359 NA non-coding upstream 65470 5570171 ~ 5579186 (+)
CI01000010_05012978_05018219 NA non-coding upstream 626533 5011379 ~ 5018346 (+)
G63390 NA non-coding downstream 13422 5659219 ~ 5659439 (+)
G63399 NA non-coding downstream 45638 5691435 ~ 5694008 (+)
G63403 NA non-coding downstream 49648 5695445 ~ 5707085 (+)
G63405 NA non-coding downstream 69919 5707971 ~ 5717250 (+)
G63442 NA non-coding downstream 235398 5881195 ~ 5881600 (+)
CI01000010_04640858_04683752 OSBPL9 other upstream 990663 4640516 ~ 4683778 (+)
G62983 NA other upstream 1195329 4448172 ~ 4449327 (+)
G62856 NA other upstream 1704711 3937757 ~ 3939945 (+)
G62838 NA other upstream 1750863 3890095 ~ 3893793 (+)
CI01000010_03320340_03346243 NA other upstream 2313470 3313695 ~ 3347796 (+)
G63524 NA other downstream 728761 6374558 ~ 6374667 (+)
G63572 NA other downstream 940131 6585928 ~ 6617806 (+)

Expression


Co-expression Network