G202238


Basic Information

Item Value
gene id G202238
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 36033440 ~ 36033716 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU274557
GCagttcaaatcaaatcaaatcaaatttatttgtatagcgctttttacaactggtgttggcacaaagcagctttacagaaacatgattacaggacaaagaatcaggcaaaacattaaacatagaatatacataatacagaacccccagtgagtgcggaggcaaggaaaaactccctcagagctgcaggaggaggaagaaaccttgggaggaccaagactcacattaaagggggggaccatcctaccactggtcaaatggcttttaaattaattttaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU274557 True 277 lncRNA 0.40 1 36033440 36033716

Neighbor

gene id symbol gene type direction distance location
mrm2 mrm2 coding upstream 214854 35811037 ~ 35818586 (+)
snx8 snx8,LOC107758331,LOC107592787 coding upstream 234440 35775028 ~ 35799000 (+)
lfng lfng,LOC107674646,LOC107703400,LOC107758333 coding upstream 417629 35601601 ~ 35615811 (+)
chst12 chst12,chst12a,LOC107758335,LOC107674724 coding upstream 647355 35377651 ~ 35386085 (+)
eif3b eif3b,eif3ba,LOC107703402,LOC107674692 coding upstream 660839 35356753 ~ 35372601 (+)
zfand2a zfand2a,LOC107568938 coding downstream 532491 36566207 ~ 36580371 (+)
LOC103040671 galr2b,LOC103040671,LOC108433115,LOC107674614,LOC107753547,LOC107564701,LOC107703387 coding downstream 618118 36651834 ~ 36677922 (+)
trnat-cgu_1 NA coding downstream 844107 36877823 ~ 36877894 (+)
zc3h7a zc3h7a coding downstream 918191 36951907 ~ 36973852 (+)
LOC103045472 LOC108433148,LOC107727127,LOC107674682,LOC107745580,LOC799265,LOC105013234,LOC106607346 coding downstream 976979 37010695 ~ 37025525 (+)
G202234 NA non-coding upstream 69395 35963798 ~ 35964045 (+)
G202214 NA non-coding upstream 129687 35876346 ~ 35903753 (+)
G202208 NA non-coding upstream 135034 35831437 ~ 35898406 (+)
G202178 NA non-coding upstream 213305 35819414 ~ 35820135 (+)
G202175 nudt1,LOC107592807,LOC107674605,LOC107758325 non-coding upstream 224015 35805564 ~ 35809425 (+)
G202259 NA non-coding downstream 74859 36108575 ~ 36108834 (+)
G202268 NA non-coding downstream 125262 36158978 ~ 36262271 (+)
G202269 NA non-coding downstream 162876 36196592 ~ 36329696 (+)
G202270 NA non-coding downstream 209900 36243616 ~ 36246643 (+)
G202307 NA non-coding downstream 375864 36409580 ~ 36470249 (+)
LOC111195488 NA other upstream 908822 35106038 ~ 35124618 (+)
psmg3 psmg3 other upstream 2218454 33811432 ~ 33814986 (+)
G201466 LOC102799139,LOC107581721 other upstream 2758533 33260173 ~ 33274907 (+)
bud31 bud31,LOC107737741,LOC107720055 other upstream 3055530 32974320 ~ 32977910 (+)
G201445 flii,LOC107581766,LOC107737969,LOC107703428,LOC107674686 other upstream 3105521 32923528 ~ 32927919 (+)
G202336 NA other downstream 555732 36589448 ~ 36940279 (+)
LOC103041887 NA other downstream 949607 36983323 ~ 36993332 (+)

Expression


Co-expression Network