G202400


Basic Information

Item Value
gene id G202400
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 37037388 ~ 37037645 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU274747
CTCGTTGTTTATCTTTAGCTTGTATTGGTGGCAGGAGTTGTGTTTCAGGCGGCACGTCATCTCCTTTTCGTAATCGTTGACGCACTCCAGATCATTCGCTGTTGGCTCTGAAACATGGTTAGAACACAATGATGACATAATAGTGTAGGACTGAGGATCTGAAGGTATGACCTGCTTTCTCTTGACAAGCAGGCAGTTAGATAGTTGCTCCactcatttttatgtttaagaAAGCAAACATGAAGGTAAATTTACTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU274747 True 258 lncRNA 0.41 1 37037388 37037645

Neighbor

gene id symbol gene type direction distance location
LOC103045472 LOC108433148,LOC107727127,LOC107674682,LOC107745580,LOC799265,LOC105013234,LOC106607346 coding upstream 11863 37010695 ~ 37025525 (+)
zc3h7a zc3h7a coding upstream 63536 36951907 ~ 36973852 (+)
trnat-cgu_1 NA coding upstream 159494 36877823 ~ 36877894 (+)
LOC103040671 galr2b,LOC103040671,LOC108433115,LOC107674614,LOC107753547,LOC107564701,LOC107703387 coding upstream 359466 36651834 ~ 36677922 (+)
zfand2a zfand2a,LOC107568938 coding upstream 457017 36566207 ~ 36580371 (+)
nsmce1 nsmce1 coding downstream 50556 37088201 ~ 37096868 (+)
LOC103021790 LOC103021790,LOC108433116,LOC103481129 coding downstream 969876 38007521 ~ 38058413 (+)
G202394 NA non-coding upstream 5038 37031223 ~ 37032350 (+)
LOC111195542 NA non-coding upstream 122650 36881360 ~ 36914738 (+)
G202341 NA non-coding upstream 364972 36671991 ~ 36672416 (+)
G202311 NA non-coding upstream 521460 36515648 ~ 36515928 (+)
G202307 NA non-coding upstream 567139 36409580 ~ 36470249 (+)
G202405 NA non-coding downstream 21873 37059518 ~ 37060161 (+)
G202406 NA non-coding downstream 23610 37061255 ~ 37063186 (+)
G202483 NA non-coding downstream 97081 37134726 ~ 37134983 (+)
G202486 NA non-coding downstream 116461 37154106 ~ 37154349 (+)
G202490 NA non-coding downstream 190218 37227863 ~ 37228136 (+)
LOC103041887 NA other upstream 44056 36983323 ~ 36993332 (+)
G202336 NA other upstream 97109 36589448 ~ 36940279 (+)
LOC111195488 NA other upstream 1912770 35106038 ~ 35124618 (+)
psmg3 psmg3 other upstream 3222402 33811432 ~ 33814986 (+)
G201466 LOC102799139,LOC107581721 other upstream 3762481 33260173 ~ 33274907 (+)

Expression


Co-expression Network