G202490


Basic Information

Item Value
gene id G202490
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 37227863 ~ 37228136 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU274881
aattctgcgtgatttgatcagccgtggttttatgttttttggatacaatccaggttagcacccgaacatccctttcagacagcttcctcttacagcgtccacagttaatcctgttggatgtggttggttcttcttggtggtatgctgacattaccctggataccgtggctcttgatgcatcacaaagacttgctgtcttggtcacagatgcgccagcaagacgtgcaccaacaatttgtgctcttttgaactctggtatgtcacccataatgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU274881 True 274 lncRNA 0.46 1 37227863 37228136

Neighbor

gene id symbol gene type direction distance location
nsmce1 nsmce1 coding upstream 130995 37088201 ~ 37096868 (+)
LOC103045472 LOC108433148,LOC107727127,LOC107674682,LOC107745580,LOC799265,LOC105013234,LOC106607346 coding upstream 202338 37010695 ~ 37025525 (+)
zc3h7a zc3h7a coding upstream 254011 36951907 ~ 36973852 (+)
trnat-cgu_1 NA coding upstream 349969 36877823 ~ 36877894 (+)
LOC103040671 galr2b,LOC103040671,LOC108433115,LOC107674614,LOC107753547,LOC107564701,LOC107703387 coding upstream 549941 36651834 ~ 36677922 (+)
LOC103021790 LOC103021790,LOC108433116,LOC103481129 coding downstream 779385 38007521 ~ 38058413 (+)
G202486 NA non-coding upstream 73514 37154106 ~ 37154349 (+)
G202483 NA non-coding upstream 92880 37134726 ~ 37134983 (+)
G202406 NA non-coding upstream 164677 37061255 ~ 37063186 (+)
G202405 NA non-coding upstream 167702 37059518 ~ 37060161 (+)
G202400 NA non-coding upstream 190218 37037388 ~ 37037645 (+)
G202492 NA non-coding downstream 4935 37233071 ~ 37295624 (+)
G202509 NA non-coding downstream 97378 37325514 ~ 37325815 (+)
G202514 NA non-coding downstream 148025 37376161 ~ 37376382 (+)
G202515 NA non-coding downstream 153360 37381496 ~ 37434186 (+)
G202534 NA non-coding downstream 209232 37437368 ~ 37437780 (+)
LOC103041887 NA other upstream 234531 36983323 ~ 36993332 (+)
G202336 NA other upstream 287584 36589448 ~ 36940279 (+)
LOC111195488 NA other upstream 2103245 35106038 ~ 35124618 (+)
psmg3 psmg3 other upstream 3412877 33811432 ~ 33814986 (+)
G201466 LOC102799139,LOC107581721 other upstream 3952956 33260173 ~ 33274907 (+)

Expression


Co-expression Network