Gene
RNA
| Item | Value |
|---|---|
| gene id | G202590 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035919.1 |
| NCBI id | CM008322.1 |
| chromosome length | 38085671 |
| location | 37794431 ~ 37798377 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| id | name | namespace |
|---|---|---|
| GO:1990399 | epithelium regeneration | biological_process |
| GO:0042246 | tissue regeneration | biological_process |
| GO:0031099 | regeneration | biological_process |
| GO:0070654 | sensory epithelium regeneration | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU274993 | True | 277 | lncRNA | 0.40 | 2 | 37794431 | 37798377 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nsmce1 | nsmce1 | coding | upstream | 697563 | 37088201 ~ 37096868 (+) |
| LOC103045472 | LOC108433148,LOC107727127,LOC107674682,LOC107745580,LOC799265,LOC105013234,LOC106607346 | coding | upstream | 768906 | 37010695 ~ 37025525 (+) |
| zc3h7a | zc3h7a | coding | upstream | 820579 | 36951907 ~ 36973852 (+) |
| trnat-cgu_1 | NA | coding | upstream | 916537 | 36877823 ~ 36877894 (+) |
| LOC103040671 | galr2b,LOC103040671,LOC108433115,LOC107674614,LOC107753547,LOC107564701,LOC107703387 | coding | upstream | 1116509 | 36651834 ~ 36677922 (+) |
| LOC103021790 | LOC103021790,LOC108433116,LOC103481129 | coding | downstream | 209144 | 38007521 ~ 38058413 (+) |
| G202556 | NA | non-coding | upstream | 138882 | 37611036 ~ 37655549 (+) |
| G202549 | NA | non-coding | upstream | 234969 | 37552356 ~ 37559462 (+) |
| G202540 | NA | non-coding | upstream | 327313 | 37466757 ~ 37467118 (+) |
| G202539 | NA | non-coding | upstream | 329464 | 37464727 ~ 37464967 (+) |
| G202538 | NA | non-coding | upstream | 338728 | 37455389 ~ 37455703 (+) |
| G202601 | NA | non-coding | downstream | 2239 | 37800616 ~ 37856330 (+) |
| G202607 | NA | non-coding | downstream | 52180 | 37850557 ~ 37854017 (+) |
| G202619 | NA | non-coding | downstream | 63569 | 37861946 ~ 37862226 (+) |
| G202627 | NA | non-coding | downstream | 104024 | 37902401 ~ 37902700 (+) |
| G202629 | NA | non-coding | downstream | 117714 | 37916091 ~ 37980048 (+) |
| LOC103041887 | NA | other | upstream | 801099 | 36983323 ~ 36993332 (+) |
| G202336 | NA | other | upstream | 854152 | 36589448 ~ 36940279 (+) |
| LOC111195488 | NA | other | upstream | 2669813 | 35106038 ~ 35124618 (+) |
| psmg3 | psmg3 | other | upstream | 3979445 | 33811432 ~ 33814986 (+) |
| G201466 | LOC102799139,LOC107581721 | other | upstream | 4519524 | 33260173 ~ 33274907 (+) |
