G202601


Basic Information

Item Value
gene id G202601
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 37800616 ~ 37856330 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU275006
ttaaaaatgatgagtttctttgattttaccaaattgaaaacctctggaatataatcaagaggaagatggatgatcacaagccatcaaaccaaactgaactgcttgaatttttgcaccaggagtaaagcagcataaagttatccaaaagcagtgtgtaagactggtggaggagaacatgatgccaagattcatgaaaactgtgattaaaaaccaccagggttattccaccaaatattgatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU275006 True 240 lncRNA 0.36 2 37800616 37856330

Neighbor

gene id symbol gene type direction distance location
nsmce1 nsmce1 coding upstream 703748 37088201 ~ 37096868 (+)
LOC103045472 LOC108433148,LOC107727127,LOC107674682,LOC107745580,LOC799265,LOC105013234,LOC106607346 coding upstream 775091 37010695 ~ 37025525 (+)
zc3h7a zc3h7a coding upstream 826764 36951907 ~ 36973852 (+)
trnat-cgu_1 NA coding upstream 922722 36877823 ~ 36877894 (+)
LOC103040671 galr2b,LOC103040671,LOC108433115,LOC107674614,LOC107753547,LOC107564701,LOC107703387 coding upstream 1122694 36651834 ~ 36677922 (+)
LOC103021790 LOC103021790,LOC108433116,LOC103481129 coding downstream 151191 38007521 ~ 38058413 (+)
G202590 NA non-coding upstream 2239 37794431 ~ 37798377 (+)
G202556 NA non-coding upstream 145067 37611036 ~ 37655549 (+)
G202549 NA non-coding upstream 241154 37552356 ~ 37559462 (+)
G202540 NA non-coding upstream 333498 37466757 ~ 37467118 (+)
G202539 NA non-coding upstream 335649 37464727 ~ 37464967 (+)
G202619 NA non-coding downstream 5616 37861946 ~ 37862226 (+)
G202627 NA non-coding downstream 46071 37902401 ~ 37902700 (+)
G202629 NA non-coding downstream 59761 37916091 ~ 37980048 (+)
G202632 NA non-coding downstream 123398 37979728 ~ 37984051 (+)
LOC103041887 NA other upstream 807284 36983323 ~ 36993332 (+)
G202336 NA other upstream 860337 36589448 ~ 36940279 (+)
LOC111195488 NA other upstream 2675998 35106038 ~ 35124618 (+)
psmg3 psmg3 other upstream 3985630 33811432 ~ 33814986 (+)
G201466 LOC102799139,LOC107581721 other upstream 4525709 33260173 ~ 33274907 (+)

Expression


Co-expression Network