jtb (jtb)


Basic Information

Item Value
gene id jtb
gene name jtb
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 28508137 ~ 28513587 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007245648.3
GACATCACCGCAACACTCACATTCAAGATGGCGGAGAGTCACGTCTGCAGTTGTGTGTTGTAAATAAAGTATCCGGTTAAATCAGCTGAACGGTGTTCTGAGCTCAGAGCCGGGGACAGCAGTTAAACACAGCGGGCTCGGAGAGATCGGGACGCGGCCGGTTCTCTCAGCGCGGAGCGGCGGAGAGGATCTGAGGAAAGCTCCCCTGTGAAGTTATGAGGGATTGTTCATAAGCAGGAGCGGTGGcggcgtgtgcgtgtgtgtgtgcccgCGGGATGGAGAGCGACTGCAGGATCCCGATGGCCTGTCTGAGACCCAAAGTTCTGGCCCTGCATGCACTCTTCTGGGGCCTGGTGTCTCTCCGAGTGTTTGGGGCAGCACTTCTAAGTGAAGAGAAGACCACAGCAACAAAGGCTGCGGCCGTGCCGTGCTGGCAAGTGGAAGAGTTTGTAGTTGCTTCAGACTGCACCTTATGTGCAGATTTCCAATCaATTTTGATACCAGCCTGCAGCGTGACAGGATATGTGGAGAAGATTAACTGTACCAAGTCCAGCAAAGACGAGTACAAGAGCTGCCGCTCTGCAATGATGGAGGAGCACATATTCTGGAAGTTTGAGGGCGCTATGTTGGGGCTTACAGTGATCTTTGCCCTGCTAGTGGTTGCCCGGCAGCGCTCCTTAGACCGACAAGCCTCAGAAAAGGTTCGCAGGCAGATAGAATCCATTTAGTATTCTGAACTATATTAAGATCTGTTGCACAAATCTGACCAGGAGGTTCCATTGCTCTGAGGTTACAGCTAAGGTCAGCtttatacagtgttatacagtgtTTAAGCACTGCTGTACTAACCAGTCCACATCCCAGGTTTCTGATTCAGCAAGATTTTTGATCACTAGAGACACTGCACGAAATCTGACACATCTCTCTGGATGGACATGATGGTCTTTTTCATTCTGACATTTAATATGGATGACGACCCATATGCAACCACGCAAAAATGACCTTTTCCACAAGGTTATTCAGGCTATGCTACAGTGATGCTGTTTTAACTGTGAACCTGTAAATGATTGAAATAGTAGAATCAGCATCCTTATAGAACAAGGGATCAAACTTGGACATAACATGAGAATATGAAAAACGACTGACAGATCCTGGACAGTTTCTTTTTCTGTGCACACATCATATGTAAGGCTGGCAAAATGTGATCTCACTATGGGTTTATGTAAATTTGTCATTTGTTTAAAATACCACACATGGTTTCGGGAATATGGGAAAGATGTGTTCTATGCTTTTGAGCCTGAAAATGCTGATCTATCTTATTTAGAAGTGTCTGATACTCAGATATTTTAATCACACAGCTCTGCccctacattttttaaatgtgtgttccAAATCGTACTAGATGAATGTAATTATTGACCCTAAAAATGGGTGTTTGCCTCTTTTGTTGTAGGGTAAgacttaataacttaataatgaATCTCAATGCTTTATGATGAACAGTTTGCTATAATAGACCATTATTGGAAacagaaaagtgtttttcttttaattgtgtTAAATTGGATTTTTATTACGGGTTATGCATTTTGGAATGAATCTTTTGAGTTGTCCTCACTTTCCCACATTAAACCTCAGCAAATGTGCAGTGATgtataatttgatttatttatataatatctccaaataatattttcattagaaatttcaaaaatatttttttttcttaaaaaaaaaaaaaaaaagtacatacaCATTGTTCATAATTTTCAGCGTGTGGCCGATCTGTCTTTTACCTGGCTGATAATTTACTTATACTTTTAAACGAATAACACGCTGGGTACTGCACTTACTGTCGCTGCTGATTTctctttaaaacactgcagatttATTTAATCTGTTTGGTTAAAATTGTAGTAAAGCTGCATTTTGCTGACTAACATTTgccagtgttttgttttttaattactggTTGATCGAGAGATGTAAGGTAACTAACTAAAGTCTTTTTGTCTTTAACTTGTGCTTTGAGATCCAGCTGTTTTCTTTAAACTCTTCACATGTGTGATCTGGTGTGTAAAGCAAGCTGGCAAAGTTATGTTTCATCATATTTGTTAATGCACAGGAAAAAACGGCTGCATGCTTTTGGCCAGGGGTTCCTCATTGGCCAGGTTTACTGGCCCACCCAAATTGtagataatgtattttttatgagaGATGTGATATTTCCtattctgtgtgtgtaaataagggaactgagaaataaaacaaaaatgaaaaa

Function

symbol description
jtb Predicted to be involved in mitotic cytokinesis. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and midbody. Predicted to colocalize with centrosome and spindle. Orthologous to human JTB (jumping translocation breakpoint).

NR:

description
PREDICTED: protein JTB

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007245648.3 True 2281 mRNA 0.41 6 28508137 28513587

Neighbor

gene id symbol gene type direction distance location
kcnq4 kcnq4,LOC107593542,LOC107706174 coding upstream 1651 28416516 ~ 28506486 (+)
nfyc nfyc,LOC107593541,LOC107591605 coding upstream 104256 28371216 ~ 28403881 (+)
LOC103025163 NA coding upstream 138795 28356540 ~ 28369342 (+)
tinagl1 tinagl1,LOC107669690,LOC106570498,LOC107706169,LOC107593537,LOC107731519,LOC107591600 coding upstream 331447 28130467 ~ 28176690 (+)
LOC103032937 gatad2b,LOC107593536,LOC107706168,LOC107731554,LOC107591599,LOC107696601 coding upstream 411320 28038748 ~ 28096817 (+)
anp32e anp32e,LOC107706176,LOC106569900,LOC107669588 coding downstream 70817 28584404 ~ 28592187 (+)
LOC103028128 NA coding downstream 143733 28657320 ~ 28672447 (+)
LOC103028750 LOC108424743 coding downstream 167484 28681071 ~ 28699780 (+)
crtap crtap,LOC107593591,LOC107706152,LOC107670137,LOC107742876,LOC107591617,LOC106588754 coding downstream 233500 28747087 ~ 28755459 (+)
fbxl2 fbxl2,LOC107696556,LOC107742856,LOC107706183,LOC107591618,LOC107669511 coding downstream 271055 28784642 ~ 28802718 (+)
G200371 NA non-coding upstream 113911 28393119 ~ 28394226 (+)
G200349 trioa,LOC107696598,LOC107669652,LOC108426039 non-coding upstream 293789 28211852 ~ 28214348 (+)
G200334 NA non-coding upstream 404934 28102973 ~ 28103203 (+)
G200333 NA non-coding upstream 410793 28097002 ~ 28097344 (+)
G200332 NA non-coding upstream 426877 28062370 ~ 28081260 (+)
G200389 NA non-coding downstream 86770 28600357 ~ 28602142 (+)
G200391 LOC108426151 non-coding downstream 102529 28616116 ~ 28618054 (+)
G200398 vps45,LOC107670145,LOC107706151,LOC103374652 non-coding downstream 127580 28641167 ~ 28642032 (+)
G200399 vps45 non-coding downstream 128498 28642085 ~ 28645520 (+)
G200386 vps45,LOC107593545,LOC106588336 non-coding downstream 133682 28647269 ~ 28649448 (+)
G200341 LOC108426039 other upstream 311939 28193574 ~ 28196198 (+)
LOC103032101 NA other upstream 520242 27978282 ~ 27987895 (+)
G200235 NA other upstream 689487 27815336 ~ 27818650 (+)
dync1i1 dync1i1,LOC107731605 other upstream 768028 27634679 ~ 27740109 (+)
LOC103023645 gngt1,LOC103023645,LOC108257427,LOC103152523,LOC103362787,LOC107085869 other upstream 1202551 27304521 ~ 27305586 (+)
lypla2 lypla2,lypa2 other downstream 1014476 29528063 ~ 29568075 (+)
eloa tceb3 other downstream 1029161 29542748 ~ 29552884 (+)
rbm24 rbm24,rbm24a,LOC107754275,LOC107592929 other downstream 2496339 31009926 ~ 31084633 (+)
G201018 NA other downstream 2499124 31012711 ~ 31015045 (+)
G201207 NA other downstream 3428615 31942202 ~ 31987057 (+)

Expression


Co-expression Network