kiaa0319l (kiaa0319l,LOC106511748)


Basic Information

Item Value
gene id kiaa0319l
gene name kiaa0319l,LOC106511748
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 29423417 ~ 29447209 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007245699.3
TGTTTCCGTGTGAAGGTGCAGGtcgtgtgtgtatgagtgtgtgtgtgtatgtgtgacagAGAGGGAGTAAAGCCTGACCTCAATAttatccagcagcagcagcgcgcaCACAGAGCGAGCCCGGCTGATACGGACATGGTGCTGCGCTGTGCTCGGTACCCTGGGCGACTGTGAGGAGATATCTCTGTAATCAGTCTAGCAGTGCAATGCTGCTGTGTTCTCACCAGCTGCTGATGTCCCTCTCTCCTAACATCTTTCTCCATTCTCCTCCTGCTGTCTCTTCAGCCTGCACACGCTGCTTGGAGAAAGACTAGTGCTCCTAGTGGGAAGATGCCCTATGCAATAAAAAGTGTCCACAGTTGCAGTTTACCACACCGGACTAGACTTCATCAGCTCCTCCTCCTGTCCCTGGGCTGTTTGTTCTGCCTCTGCCCTCCTGCTGGGGTGGGGGCCAGCCTGTGCAGGGTGTCTGGAGGAGTGTTGGGGATCTCCTGTGGTGGTGTAATTGGTCTGGGCTGGCGGCCGCTGGCTGTGGACCGTGGTGGAGCGAATTGCTGGGAGTCGTGCTGCCTGGAGCCCTCCTGCAGTGCAGTGTGGAGCCTGGGGGGATACTGCGTGTTGCTGAGATGCTCCCTGCCCAGCGGCTGCTCCATCTCCTCACTGCCTCAGCCTCACGTCCAGTCTCTGGGCCTTCTGCAGCTGCTCAGCAAGAACACACCGCAGAAGTCGAGGAACCCTCGACAGGCGCTGATTGCAGAGCTCAAACCCAGCACTGAACAAGACATAAATTCAGGACAATCCTTCAATCAGACATCTCCAGCAACAGCTGTGACTGGGTTGGCCCTTCCCGTGACAGCTAATAAAACACTCAATGAGCCCACCAATGGCAGCAGAGAGGAGGCAGTCCCATCAGCTTCTTCACAGAATTCCACATCACCAGAGGACACTGTGGATCATTCAGCTtccaacagcactgctgagtcACCAACCGTCACACCTCAGTCTTATACTTCCACCCCAGCAACCCCGGCTGTAAAGGAGCTCATTGTATCCGCCGGTGAGAATGTGGAGGTCACTCTTCCACGCAATGAGGTGGAGCTGAATGCTTTTGTTGTGCCAGCACCACCTTTAGGTACTGCCTATGTCTTTGACTGGAGTTTGAAGACCCACCCCAAAGACTACAGTGGAGAAATGGAAGGGAAACATAGCAAAACACTCAAACTAAGCAAGCTGACTGTGGGGCTGTACGAGTTTGAGGTGATAGTGGATGGTGATGGTGCtcatggagaaggctttgtcaACGTTACAGTGAAACCAGAACCAAGAGTGAATAAGCCAcctgttgctgtggtatcaccAAAATCCCAGGAGATATCCTTGCCAATAAGCTCCACTGTGATTGATGGCAGCCAGAGCACTGATGATGATAAGATAGTGGCGTGGCACTGGGAAGAGGTGAAAGGCCCTCTTAGGGAGGAAAAGGTCTCAGCAGATACAGCAGTTCTCACCCTTACCAGTCTTGTTCCAGGCAACTACACCTTTAGCCTCACAGTGACAGACTCTGATGGGGCTCAGAGCTCAACCCAGGCCATGCTGTCGGTCAACAAGGCTATGGATTACAGACCTGTAGCCAACGCTGGAGCAAATCAGGTCATCACACTGCCACGCAACTCTGTTACTCTTTATGGCAACCAGAGCACAGACGACCATGAACCTCTGGCTTATGAATGGTCACTCAGCCCAGAGAGCAAGGGCAAGGTGGTGGAGATGCagGGAGTCCGGACCCCCACTCTTCAGCTGTCTGCTATGCAGGAGGGGGACTACACCTTCCAACTCACAGTTACAGATTCCTCTGGACAGCAAGACACAGCTCAGGTCACTGTAATTGTGCAACCAGAGAATAACAAGCCCCCTGTAGCAGATGCTGGACCAGACAAGGAGCTGACGCTTCCAGTGGATCACACCACCCTTGATGGCAGCAAGAGCACTGATGATCAGAAAATAGCCACCTACCACTGGGAACAGACCAAGGGCCCAGAGGGTGTGAAGATTGAGAATGCAGACAGTGCTGTGGCCACAGTGACGGGGCTTCAGGATGGGACTTATATATTCATGCTGACGGTGACTGATGAGAGGAACCTGCATAGTTCTGACACGGTCACTGTGACTGCTCGTGAGGAGGTTGACCAGCCACCTGTAGCCAGAGTGCAGTCCAGCCCCTCAATCACGTTACCTGTCCGCACAGCAGTCCTGGACGGATCCCGTTCGTCTGATGATAAGGGAAGCATCAGTTATGTCTGGACTCGGGATGGAAGTAGCCCAGCAGCTGGGGATGTCCTGAATAACTCTGACCACCAGGCAGTGCTCTTCCTCGGCAACTTGGTGGAGGGGAAGTACACCTTCACTCTTACTGTGACCGACAGCAAGGGCCAGAGCCACGCAGACACAGGCACTGTAGAGGTCCGCCCGGATATATGGGAGCGGGACCTGGTGGAGCTGGTCCTGGAGGTGACTGTGTCTCAGGTGTCCCACAGGCAACGGGACATGCTGCTCAGACAGGTTGGCGTCCTGCTGGGGGTACTGGACAGTGACATCATTGTGCGGGAAATCGGCGCATTTAACGAGCACAGCACTCGTTTAGTATTTCTGGTGTCTGGAGGACCCGGAAGGCCGCCTCTCTCTGGTCACGGTGTTGCCACTAGCCTGCGAAATAAACTGCACAAGTCGAAAAATGAGTTCTTCATCTTCAAAGCCCAGCGGGTGGACACAGTCATCTGCCAGCTAAACTGCTCTGGCCATGGAGAGTGTGACTCTTTTACCCGTCGCTGTGTGTGTCACCCGTTCTGGATGGAGAACTTCATACGAACACAGCTGCAGGATGCAGAGAGCAACTGTGAATGGAGTGTTTTATACGTGACAATAGCATCCTTCATGATAGTGGTAGCAATAGCAGCTGTGATCTGGGGGATGGTCTGCTGTTGTAACAGACGCAAAGGAAAAGTCAGACGTAAAAGTCGTTATAAAATGCTTGACGGAGACGACCAGGATATCATGGAATTGCACCCACCTAGAGCAGgCCGATTGAAGCCAGGCCCTGCTCCCACTTCCTCTGCTCTCATGCACTCAGACTCAGACCTGGACAGTGACGATGGCCAGGCAGGTGTCCCCTGGACTGACAGAGAGCGGGGCCACCTCCTGAAACCTCAAAATGGGTCCCTGCGTAATGGCCAGGGGCCACACAAAGCCAAAAAAACGAGAGAGGTGCAGGAGCTGCTATAGCGGCATGGACCAACCACTTCAAAGTATTTTACATGGACCTCTCACTCCCTCACGCTGGCATGTCACTTAGGAGACTTTGAGTTGTGTTTATGGGGAGATTGTTTTTTATGACTGAAGGCTGTGTTCTCCCGTTGCCAGCTCACACTGAATCTCAGCCCAACCTGAGCCAGAGACTAGTTTAATGCAGTAACTATGCTGCTGTTTCTTTCCTGTTCGAAAAAAAGAGTTACAAAAAGCCATGTGTCCCCAGAGTCATTAAGAATGTATTAGATATAATGAAGGAGTCATGAAAGATGTGAATTTGGGGATTGGCTGCTTTTACCCACGTCAACTTGAGCATAACCAAGTAAGCTGCCTCTCTAGGAGAGATGACCCACCTAATGACATGTCACAAACTAGAGGACAGGTGAGCCAGTCACATTACCCATGACCCATTACCTTGTTTTTTATAAACTGGTGATCTGTCCCTTCTAATCACTGCCTTGAACACCTCCAAAGTAAACAGCTTTCTTACACTTAATAGTGGCAATAGTGCAGCGTTGCAGTACTGTAGTGTACTCAGCGCTGCACCCATCTCCTCCGCCAAGTGGTATGACTGCATGTATGACTGAGCTGTgctagatttattttattgagaataatgcatgttttatcagggtgtgtgtttgtgagtgtgtctgtATGGCCTTTTTGGCAATGTGCGTGTATCAGACCTATGGTTGTCAACTTATTTGCTACTCAAATCACCAGCAAACAACAGTGAAGTGTGCAAGTGCTTGGCTTTGTTTGTGAAGGTTCGGAGGAGCAGTTGAAGGATATGAGTTGAAGGGATATTGGTGTTCTTCGATGGCTTGTCTCACACTGGAAAAGACTGAATGGACGTAACACTGGACCTCACCTCTCTTTGGCCCCAGCAAAGCTCCTGAAGAGTAGACGCAACAGAAAATATAAAGCTGAGCTTGGCACGCACCTCAAGACACGGACTGCTTGAACCTTGATGACCACTTTATGTCCTGTCTGATTTTAAATTTAACTTTAGCTGGACACTTGATTCTCTTGCACTTTGTGTTACTCATGATAGTTGTCCGCTCTCACTGGTTGATATAAATGCTGATGCTCATTAGTCAGTTGAAGAATGCCTTTGATAAAGGCTTTTGTGATAATGTGTTTGATAGACACTCTTTTTCCATTGTTCCTCTTATTAGTGATGAATGGGCATATAATACAGGAAGACTACTGGAATTGAATGTGCGCACATTGGGGTGTTGTAGGAAGAGCGCTgagccctgttttttttttttgttgtttgtttgttttttaatccaaGAACATTTAATATGAATGCCTTCCTCACAAATGCATGAAAGGGAAATGTAAACCCTCCtctaaacagagagaaaaaaaatatgagaagttcctcattttattttcaatgtttttaagtGAAGGATTCCCTGTGTTATGTGACTCAATCAGAAACAACTGGATTATCTTAAAATGAAGATCAAGAAACTTTAAATCTGTTTATGttctgttattttgtcccaATGAATCTGCTTTCCAaatacattattagaaacatc

Function

symbol description
kiaa0319l Predicted to enable calcium ion binding activity. Predicted to act upstream of or within homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasmic vesicle and plasma membrane. Is expressed in axis; brain; head; otic vesicle; and trunk. Orthologous to human KIAA0319L (KIAA0319 like).

NR:

description
PREDICTED: dyslexia-associated protein KIAA0319-like protein homolog

GO: NA

KEGG:

id description
K24404 KIAA0319L; dyslexia-associated protein KIAA0319-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007245699.3 True 4862 mRNA 0.49 22 29423417 29447209

Neighbor

gene id symbol gene type direction distance location
syce1 syce1 coding upstream 21134 29397398 ~ 29402283 (+)
LOC103039490 NA coding upstream 30964 29372764 ~ 29392453 (+)
LOC103038962 NA coding upstream 53135 29309371 ~ 29370282 (+)
cd164l2 cd164l2 coding upstream 116779 29297628 ~ 29306638 (+)
wasf2 wasf2 coding upstream 143234 29272340 ~ 29280183 (+)
cap1 cap1,LOC107706206,LOC107697048 coding downstream 2407 29449616 ~ 29460631 (+)
LOC103042153 LOC108426616 coding downstream 21540 29468749 ~ 29478259 (+)
LOC103043706 NA coding downstream 31916 29479125 ~ 29483741 (+)
LOC103044018 eef1a1l1,LOC103044018,LOC108426629,LOC100526699 coding downstream 48891 29496100 ~ 29500103 (+)
LOC103044302 eef1a1l2,LOC103044302,LOC108426655,LOC108256978,LOC108426629,LOC103044018,LOC107589444 coding downstream 53152 29500361 ~ 29507353 (+)
G200628 NA non-coding upstream 404320 29018573 ~ 29019097 (+)
G200511 NA non-coding upstream 641383 28770134 ~ 28782034 (+)
G200482 LOC108426192,LOC108257078,LOC103472090,LOC106960294,LOC106931510,LOC103143289,LOC105893891,LOC107593550,LOC107706177,LOC107669544,LOC107696586 non-coding upstream 678093 28703778 ~ 28745324 (+)
G200780 ppt1,LOC107697049,LOC107706207,LOC107589449,LOC107591677 non-coding downstream 14952 29462161 ~ 29467527 (+)
G200785 NA non-coding downstream 37731 29484940 ~ 29485686 (+)
G200799 NA non-coding downstream 145811 29593020 ~ 29593537 (+)
G200803 LOC108426791,LOC101073009,LOC107696579,LOC107591646,LOC101165157 non-coding downstream 188912 29636121 ~ 29640007 (+)
LOC111195537 NA non-coding downstream 227577 29674786 ~ 29744233 (+)
G200341 LOC108426039 other upstream 1227219 28193574 ~ 28196198 (+)
LOC103032101 NA other upstream 1435522 27978282 ~ 27987895 (+)
G200235 NA other upstream 1604767 27815336 ~ 27818650 (+)
dync1i1 dync1i1,LOC107731605 other upstream 1683308 27634679 ~ 27740109 (+)
LOC103023645 gngt1,LOC103023645,LOC108257427,LOC103152523,LOC103362787,LOC107085869 other upstream 2117831 27304521 ~ 27305586 (+)
lypla2 lypla2,lypa2 other downstream 80854 29528063 ~ 29568075 (+)
eloa tceb3 other downstream 95539 29542748 ~ 29552884 (+)
rbm24 rbm24,rbm24a,LOC107754275,LOC107592929 other downstream 1562717 31009926 ~ 31084633 (+)
G201018 NA other downstream 1565502 31012711 ~ 31015045 (+)
G201207 NA other downstream 2494993 31942202 ~ 31987057 (+)

Expression


Co-expression Network