c23h6orf62 (cunh6orf62,c24h6orf62,zgc:111986,LOC103042486,LOC107555566,LOC107724342,LOC107743835,LOC107702127)


Basic Information

Item Value
gene id c23h6orf62
gene name cunh6orf62,c24h6orf62,zgc:111986,LOC103042486,LOC107555566,LOC107724342,LOC107743835,LOC107702127
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 23171731 ~ 23176738 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007249294.3
CCTTCAGTTGCTGCGTGACGTTCAGCTCCAGCCATTTTGAGGTGTTTGTTCAGAGACGcgcgtttgtttttctgcacaGGCGTGCGGGGAGAGGAGAGCGGGCACTCGGCAGAAGAACGACTCCAAAGACATTTTACACAACCAGTGTGTGATTATGGGTCCACCGAGAGGCAAATCCAGCCGTTTATTAACCGAAAGACGGGAGAATTTCAGCTGGTTTGTTCATTTATCTTGACATGGCATGGGTGGCTTGGTCGGTCGGTCTGTGACGACGGAGGAAAACAACGCAGCAGCGGAGCGGAGAGAGGAGCCGGGCAGAAACTAGAGgagaagatagagagagagggttcaTTTTAAAGATTCTTAGATATTTATACTccacagcagaaaaaaacagagctgtGGATTATTATTTGGAAATAATAGATAGCCATACAGTTACTGCGGTTACACTGATAACAAACGAACCAACGATACAAAAACAATGATGACGATAAACTCGCGAGATTATGAGTAACGTTAGGTTAACTCCTAacaggttagctagcttagctaactagccTAGCTTACTTAAAACCACATATAGACACGTACAAACGGTTCCCCTTTCTATCTGCGGGCAGAGCCGTTGCGACAGAGACCTGAAAACAGGAAGAAGAACCTAAGGGCAGAAatgtagttagcttagctaacctgcTAGCTATTAACTAATAGTGAGGCCTTTGGCTAGACAGCTGTTAAAAGTCAGTCTGAAATGTAGCTAAGGCTAACTAGCCTAGCTGACATTAAGTCAACTTTGCGtgtaagttagttagctaactatcggCAAGGACCGCTGTGTACGGTAACTGTGGGCGAGCGTCAGTAACGCAGCTAGCGTttgctaggttaactagttacgTGTCttggctagttagctagcttattagctagctagcttagttaACTACAAATCCGAGTTAAGTTTCGTTAGCAAACCTAATAACTCGTTACCTACttggctaacgctagctaggcAGCCAAAAGGAGCCTGAAATGGAGACCCACAGCAGCGGTGACACTACGGCAGACCGTGGGCCGACCTCACGGCCTTAAACCCCAGCATGTCCAGCAGTTTCTGTGTTATTGTAGCTAACTACCTGGTGCCAAAAGCCTCCAGGCATCTTACATTTCTCTGCCATGGTCGCCTTTAACCCCCAGTCATTCACTCCTGCGTTACTGAGGACAGTTTAGTGCAATATGAACACAAACCAGACGCGTCATGGAGGAGACTCCAAAgtccgcagcagcagcagccaggtCTCCTAAAGGTCTCGTTTATATGAATAtgacgttttaaaaaaaaaaacttcaggtCGATTTGTTCAACTTAAGCCAACTTCAGGGATCTAGTTAATTAACTACTTCTCCACTCAGCCAACTAGCTAGTAAACTatgtaaaagaataagaagaaagCAGCCGTGGGCATGTCGTTCGTTTGTTTTGACATTTGCAGTTAGCTCGGTTTATTATAGCTAACTTACATCTATAAAGAGACGCAGATTTGAGACCTATTTGAGTTTCTCTGAGCTCTGAACTGAAGTCTAATCCTTATTAGTGAGTTATTAGTACTATAACTAATACATTTGGCCTGTCATTCAAACATGGCGTTATAATTCACACACATGATAAATTGTTGAGCCCCATGTGCACTCGCTACCCAGCCTGATCTAAACATGACTtgatttagttaaaaaaatgtcttgatCTTGGGAGATTTTGTTTAATTAGAATTAGTGTAAATTAACGTTACTGGTAGTGCCggatatttcttttcttttcactgtttttacaaAAGTAAAGCAACGCAATTTGAACATCGTAGCCTATTCATAGAAGGCACTGAGATAAGGGGAAGTTTGGTAAAAGTTtacagagaaagaaataaattcTACACAACAATGGGAGACCCAACATCTCGAAGAAATCAAACGAGAAACCGACTCCGAGCCCAGCTCCGGAAGAAAAGGGAATCTTTGGCTGACCAGTTTGACTTCAAAATCTACATTGCCTTCGTGTTTAAGGAAAAGAAAAAGAAGTCTGCTCTTTTTGAGGTTGCTGAGGTGGTTCCAGTCATGACCAACAACTATGAAGAAAATATTCTCAAAGGAGTGAAGGATTCAAGCTACTCCTTAGAAAGTTCTTTGGAACTTCTTCAAAAAGATGTTGTGCAGTTGCATGCCCCTCGCTACCAGTCAATGCGCAGGGATGTAATAGGTTGCACCCAGGAAATGGACTTCATCCTATGGCCCCGCAATGATATCGAGAAGattgtctgtcttctgttctcCAGATGGAAGGGTGCTGATCATGAACCATTCAGGCCTGTTCAGGCGAAGTTTGAATTTCACCATGGAGACTACGAGAAACAGTTTTTGCATGCTGTTGGACGCAAGGACAAGGCTGGGATGGTTATGAACAACCCGAATCAGTCAGTGTTTCTTTTCTTGGACAGACAGCACTTGCAGACTCCAAAAACCAAGGCCACAGTTTTCAAGTTGTGCAGCCTCTGCCTCTACCTGCCGCAGGATCAGCTGACCTGTTGGGGGGTTGGAGATATCGAAGATCACCTTCGTCCATACATGCCAGACTAGGAGAGACATAGATGATTCCTCCCAAAGCCACTGAAGCAAGTTGACCTCATTCACATCCCTCAGTTGAATAGAATTGAACTTGTGCTTGGAACTCTCCTTTTTGTTAACCACTCATTTTCATTCTGAGGTTAATTTAGTTGGCTTTTTTCCATATTCCTCCTACCAACCAGTTTTGGTTTGGTTCACTCATTTACTTTTACCCTTAACCTGTCTGCTTTTATTTGAACTTGCACGAACATTGTTTTTGAGTGGTTGTTCTCTTGGAGCAGCACTGTCAACAGCAGTCACAGAAGAAACTCTTTATATTGGGGGATTAAAAAGCAAACTGATGCAAGTGGTTCCTTAAATATGGGCCTCTTGGACTGTTTCTGCTATCAGTGACATGAGTGGATAGTTAACTTGTCTGAATTTGTGGGGGGAAAAGGATAGTAGTAAGAGTAATGACAATCAGTGACAGATGATCAAACACCCTGCATAGTCTTGGTGAAAAGGCTAGTTCTCCTAGATGAACAAtacttaaattttattttggtGTAGACATTGCTTATCATTTTCAACTGCCTGAGTTTTGCTGGACGTTTTATTTGAGTGTCATTCCTTGCCTGTAAGATGTCAAACTTTTCTTCATCGtatgtttttgtaatttctgGAAGAGTGGTGCCAGATGGGTTGGAGATATTAAATGTGGATTCTAGATAAGCTGTTTGGCATTTCTGAAAATCAATGTTACCAGTCATGCAATTCATGTAATATTCATTCATGCGACTGAGacctgattttgttttttggtggTGGCTATTCAGTTGGATACTAATGCTTTAAGTTCATGTACttatcaaaattattttgtggGGGGGAAATTGCGCATCATTAaactttgtttgatttttttttccacaaccCCCTTTATGAATACTAAGAATTGCAGAGCTTGGAACTTGGTATCTGTAAGCCAGCTTCGTTGGGTAATAAAGCATAAGATCTACCCACCCTT

Function

symbol description
zgc:111986 Orthologous to human C6orf62 (chromosome 6 open reading frame 62).

NR:

description
uncharacterized protein C6orf62 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007249294.3 True 3628 mRNA 0.42 5 23171731 23176738

Neighbor

gene id symbol gene type direction distance location
ripor2 fam65b,LOC107555568 coding upstream 10512 23055198 ~ 23161219 (+)
LOC103044827 si:dkeyp-120h9.1,LOC108257412,LOC107584261,LOC106570559,LOC107702119 coding upstream 118702 23033655 ~ 23053029 (+)
hey1 hey1,LOC107584259,LOC107555572,LOC107702120,LOC107696214 coding upstream 162997 23004283 ~ 23008734 (+)
LOC103046770 zbtb10,LOC107702118,LOC107724278,LOC107584258,LOC107743826,LOC107555573 coding upstream 237378 22918815 ~ 22934353 (+)
LOC103021724 pag1 coding upstream 343299 22811769 ~ 22828432 (+)
LOC103043314 t106b,LOC103043314,LOC108425340,LOC107696205,LOC107709260,LOC107584266,LOC107702131,LOC107555560,LOC107724356 coding downstream 7185 23183923 ~ 23196064 (+)
scin scin,LOC107724348,LOC107702132,LOC107696204,LOC107709261 coding downstream 25944 23202682 ~ 23227071 (+)
LOC103041859 LOC103041859,LOC108425359,LOC107696203,LOC107584268,LOC107555559,LOC107702133,LOC107709262,LOC107724349 coding downstream 53469 23230207 ~ 23233003 (+)
bzw2 bzw2,LOC107709265,LOC107702135,LOC107724358 coding downstream 265256 23441994 ~ 23469531 (+)
rbbp4 rbbp4,LOC107584269,LOC107568807,LOC107709266 coding downstream 294860 23471598 ~ 23477408 (+)
G199266 gmnn,LOC107696207 non-coding upstream 2138 23165496 ~ 23169593 (+)
G199250 NA non-coding upstream 170246 22936494 ~ 23001485 (+)
G199244 NA non-coding upstream 235466 22935761 ~ 22936265 (+)
G199243 NA non-coding upstream 286494 22880651 ~ 22885237 (+)
G199240 NA non-coding upstream 293375 22871075 ~ 22878356 (+)
G199333 NA non-coding downstream 107402 23284140 ~ 23284424 (+)
G199337 NA non-coding downstream 159523 23336261 ~ 23336497 (+)
G199362 NA non-coding downstream 249140 23425878 ~ 23426084 (+)
G199378 yars,LOC107691530,LOC107568799,LOC107687080,LOC107724337,LOC107709269 non-coding downstream 411024 23587762 ~ 23593581 (+)
G199417 NA non-coding downstream 463810 23640548 ~ 23640780 (+)
znf704 znf704,LOC107702114,LOC107555575,LOC107696217 other upstream 302474 22830231 ~ 22869257 (+)
G199091 stk3,LOC105907728,LOC107724280,LOC107702102 other upstream 948695 22219265 ~ 22223036 (+)
LOC103037930 NA other upstream 1788731 21358464 ~ 21383000 (+)
G198815 NA other upstream 2368841 20802371 ~ 20802890 (+)
mrpl36 mrpl36 other upstream 2896877 20273021 ~ 20274854 (+)
ndufs5 ndufs5 other downstream 2441190 25617928 ~ 25620135 (+)
c23h18orf21 LOC103027551 other downstream 3409501 26586239 ~ 26613188 (+)
cdk6 cdk6,LOC107667775,LOC107567973,LOC107722162,LOC107558583,LOC106588946 other downstream 3655216 26831954 ~ 26892623 (+)
G200104 NA other downstream 4107482 27284220 ~ 27284567 (+)
LOC103023645 gngt1,LOC103023645,LOC108257427,LOC103152523,LOC103362787,LOC107085869 other downstream 4127783 27304521 ~ 27305586 (+)

Expression


Co-expression Network