LOC103024228 (gmpr,LOC103024228,LOC108425204,LOC107584250,LOC107702110,LOC107696222,LOC108257268)


Basic Information

Item Value
gene id LOC103024228
gene name gmpr,LOC103024228,LOC108425204,LOC107584250,LOC107702110,LOC107696222,LOC108257268
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 22459246 ~ 22474209 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007249323.3
gtgagtaCGGGCCCTCGCCAAATAAAGCCATGGGGGCTTGGGCTGGGACGGCCCGTTCCACGCTATAAATACGCTGGGCTTCTGCCGATTCGGGTTTGGTGGCTGGACCTGCACCGCAGTAAGCGCACCGGCCCAGCTCAGGAGAATCTCATTCACACTCAGGCCTTCAATCATGCCACGGGTGGACGCGGACCTCAAACTGGACTTTAAAGATGTCCTGTTCAGACCAAAGAGGAGCAGCCTCAAGAGCAGGTCAGAGGTTGACCTGCAGAGGACCTTCACATTCCGCAACTCAAAGCAGACCTACAATGGCATCCCAATCATTGCAGCTAACATGGACACCACAGGTACATTTGAGATGGCCCAGGTTCTGAGCAAGcACACGCTCTTCACCGCCATCCAAAAACACTACTCCCTGGAAGAGTGGAAGACGTTTGCTGCAGAACATCCAGAATGCTTAGAgCATGTGGCGGCCAGCTCAGGCAGCGGCAAGGCCGATCTGGAGAAACTCTGCAGCATTCTGGAAGCCATTCCACTCGTTAAGTACATTTGCCTGGATGTAGCCAATGGATATTCAGAGCACTTTGTGGAGTTTGTTAGAACTGTTCGGGAGAAGTTCCCCAACCATACCATCATGGCTGGAAATGTGGTGACAGGAGAGATGGTGGAGGAGCTCATTTTGACTGGAGCTGACATCATCAAAGTGGGCATCGGGCCAGGTTCTGTATGCACCACCCGCATCAAGACTGGAGTAGGTTATCCTCAGCTGAGTGCTGTTATTGAGTGCGCAGACTCGGCTCACGGACTAAAGGGACACATCATCTCTgatggAGGCTGCAGCTGTCCTGGAGATGTTTCCAAAGCTTTTGGAGCAGGGGCAGATTTTGTCATGCTGGGAGGCATGCTGGCCGGGCATGACCAGTGTGCTGGTGATGTCATCGAGAAGGATGGGAAAAAGTTCAAGATGTTCTATGGCATGAGCTCGGACACAGCCATGAAGAAATATGTCGGTGGTGTGGCAGAGTACAGGGCGTCTGAGGGCAGGACAGTGCAAGTGCCCTACAAGGGTGATGTGGAGAACACCATCAGAGATGTCCTGGGCGGAGTGCGCTCCACCTGCACCTACGTAGGAGCAGCCAAGCTGAAGGAGCTCAGCCGCAGGACCACCTTCATCAGAGTCACACAACAGTCCAGCCAGATGTTCACCTAGACTCCTAGCCAGCAGTGCATTCAGATTACACACACCttctgtactgtacacacacccACCAGGGTACCATGCAGACAGGCGATCAGCCACACTCACCAACCCAACCAATGTCTGTAGCAGTCAGTAAAGCACTGGAGCAGCAACTGATACATAAACGCCTTGATCTcggaagaagaaaaagacataCAGCCTACAGTACCTCACTGGGTCAGCCAGGGCGTCCTGATTTCTGCATGTTTTTAGAGTACAGGGATCTTTCATTGAGaataaacacaacaaacacacacacgcaaataaacacacactacgACAATGCCACAGATTCATTCGTTTTCGCTCAGGACCCGTGCTGCACGCCGTTATATGTTTCCTTGTGAGAGCAGCCAATTTACAGCATGATTCAGCCTGTTTTTATTGTAAGCCTTTAAGCTCTCCaagcatggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagatgacAACGAAGACAAGGTACGAGAGAGGTTGAATAGGGACTCAAATAAGCCCTTAGGGAATACCATGCTTGAAGAATCCATTCATTGAAACTATGCAACAGCGTTCGCAATGAAAAGATATGAGCCATTGCCAGGTCTGAAGATGAATAAAGGCATTACTCATCCTCCTTTTACAGCAGAGTTACATGTTGACTGTGTGAAACCTTGCGACGGCTTCCGGGTGTGCTAGCACTTCACATGTTTTGGTGTATGATGTAAGCTTTGACTTGATTTAAGCAGAAACCGGTGCACAGCATACTGTACTAGGTCTGCTGGCCTGCGTCCTACATGAATGTACACTGGGTGTGGCTGGATGTAGCTGCAGACCAGGGGAATGTAAATGGCTGCACTGCCCAGTGAGTTCTTCATGCAGGTTATTTGTGCAGTTCAGATCAGGAAAAACTCTGTATGTCTGTGAAATGTGACACTGTGACTGGAGGTAATAAAGATATACTGGTGATGACTTTG

Function

symbol description
gmpr Predicted to enable GMP reductase activity and metal ion binding activity. Predicted to be involved in purine nucleotide metabolic process. Predicted to act upstream of or within nucleotide metabolic process and purine nucleobase metabolic process. Predicted to be part of GMP reductase complex. Orthologous to human GMPR (guanosine monophosphate reductase).

NR:

description
GMP reductase 1

GO:

id name namespace
GO:0009117 nucleotide metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0003920 GMP reductase activity molecular_function
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K00364 E1.7.1.7, guaC; GMP reductase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007249323.3 True 2193 mRNA 0.50 9 22459246 22474209

Neighbor

gene id symbol gene type direction distance location
fuca1 fuca1 coding upstream 368 22448746 ~ 22458878 (+)
zbtb8b zbtb8b coding upstream 14091 22438713 ~ 22445155 (+)
LOC103026000 zgc:91944,LOC103026000,LOC108425172,LOC107710043,LOC108257190,LOC107556377,LOC107724285,LOC107702106,LOC107696225 coding upstream 51553 22394609 ~ 22407693 (+)
LOC103025175 hpca,LOC108425130,LOC105005722 coding upstream 86897 22312255 ~ 22372349 (+)
LOC103026526 nt5c1aa,5nt1a,LOC108425118,LOC107653825,LOC107702103,LOC107710055,LOC107724290 coding upstream 207206 22227122 ~ 22252040 (+)
LOC111195531 pag1 coding downstream 239950 22714159 ~ 22777841 (+)
LOC103021724 pag1 coding downstream 337560 22811769 ~ 22828432 (+)
LOC103046770 zbtb10,LOC107702118,LOC107724278,LOC107584258,LOC107743826,LOC107555573 coding downstream 444606 22918815 ~ 22934353 (+)
hey1 hey1,LOC107584259,LOC107555572,LOC107702120,LOC107696214 coding downstream 530074 23004283 ~ 23008734 (+)
LOC103044827 si:dkeyp-120h9.1,LOC108257412,LOC107584261,LOC106570559,LOC107702119 coding downstream 559446 23033655 ~ 23053029 (+)
LOC111195530 NA non-coding upstream 36870 22414247 ~ 22422376 (+)
G199137 LOC103026708,LOC108424525,LOC108257191 non-coding upstream 66681 22391366 ~ 22392565 (+)
G199103 NA non-coding upstream 158775 22299894 ~ 22300471 (+)
G199097 NA non-coding upstream 197471 22261114 ~ 22261775 (+)
G199090 NA non-coding upstream 240859 22215879 ~ 22218387 (+)
G199145 NA non-coding downstream 3339 22477548 ~ 22485763 (+)
G199192 NA non-coding downstream 204898 22679107 ~ 22684436 (+)
G199197 NA non-coding downstream 229302 22703511 ~ 22704656 (+)
G199202 mrpl53,LOC107702080,LOC107584350,LOC107724306,LOC107555578,LOC107743841 non-coding downstream 232277 22706486 ~ 22709232 (+)
G199240 NA non-coding downstream 396866 22871075 ~ 22878356 (+)
G199091 stk3,LOC105907728,LOC107724280,LOC107702102 other upstream 236210 22219265 ~ 22223036 (+)
LOC103037930 NA other upstream 1076246 21358464 ~ 21383000 (+)
G198815 NA other upstream 1656356 20802371 ~ 20802890 (+)
mrpl36 mrpl36 other upstream 2184392 20273021 ~ 20274854 (+)
fndc5 fndc5b,LOC108433842,LOC108272379,LOC107691512,LOC107584283,LOC107687074 other upstream 2370259 20053028 ~ 20088987 (+)
znf704 znf704,LOC107702114,LOC107555575,LOC107696217 other downstream 356022 22830231 ~ 22869257 (+)
ndufs5 ndufs5 other downstream 3143719 25617928 ~ 25620135 (+)
c23h18orf21 LOC103027551 other downstream 4112030 26586239 ~ 26613188 (+)
cdk6 cdk6,LOC107667775,LOC107567973,LOC107722162,LOC107558583,LOC106588946 other downstream 4357745 26831954 ~ 26892623 (+)
G200104 NA other downstream 4810011 27284220 ~ 27284567 (+)

Expression


Co-expression Network