thap7


Basic Information

Item Value
gene id thap7
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 13089517 ~ 13094495 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007254716.3
CGCGCACACGTATTGTGCTGTGTCCCTAACGCGCATGCGCACAACTATAAAGGAAGAAGACGACAGCCATCTTCGTGAGGTCGAAACGCTCAGTGATGCCCAGACATTGCTCTGCCGCTGGCTGCAACTCACGTGACACCAGAGAAGCTCGGAAATCTGGTCTCACTTTTCACAGgTTGCCAAAAAGAGGCAATCCTCGGCGTGCTACCTGGATTCTTAATTCTTGTCGCAAAGGTCCGGAGGGCAAAGGGCAGTGGGACCCTCAGAGTGACTACATCTATTTTTGCTCCAAACATTTCACCCCTGACAGCTTTGAACTCTCTGGGGTCAGTGGCTATCGCAGACTAAAAGATGATGCAGTACCCACCTTGATTGAAGCCCCAGCTTACCAAAGAGGAAAGAGCTCCAAAGCAAAAGGCCGGGCACATCATGTGGAAAAACAGAAAAGAGCAAGTAGTGGAAAAGGGAAACTAAAGAGCAAGGACACTTCAGTCAGTGATGCTTTCGTACAGAATGCAACTGCAGTTGATGAAGCTGAACACTCCAGCACGATAAATGGGGAAAATGGAAATGAGCAAAGGACTTCACTTTTGTTTCAAGATGTTCAAACTAATAAGATATCATCACAAGGTCAACCAACAGATGAACCCACCCCTGAACAAACATCCCCACGACCACCTTCTCCATCCTGCTACATGAGGCGTCTCCCCCCACCTCCTGGCTTTTATCTGGCCAAAGAGCACAACTATGCTCAGCTCTGCCCATTGGTGTGGCGTAAACGTTATGACAAAGCTATCGACAACTTGGAGAAAGCTCTACGTCTGCTTAGTGCTGCCCGCCGCCGGGAAAACCGTCTGCGGCTCACCCTTCTTCGCCTTAGAGAGCACAGACTAAAGAGCACTTTATCCCGGACTCCAGACAGTGGCCAAAGGAAGGAGGGTCGTGGGAGGCCTCGCCTTTCTGCTCCACTGAGTGGAAAAACTGCAAGAGCAGACTTAAGTGGGCTGGAAGAGAATGAGATAGAGGGTGCGCCAGAAGACATGGATATTTTCACAGAAGAAGGTTGGAGACGGCCAACACCAACAACAAAAGAGAGGGCACCTGTAGAAGAGGAGGAAggatgctgtttttattgtggACGAGGTAGAGAAGACGAGGAATCCAAAGAAGTGCGGGATAGAAGACAGTGTCTCAGAGCCACAGAAACCCAAGTGTCCCATGGCAGTTCTAAACTGAGGAGAATTCAGAGAGGTAAAAGTGGAAAGACGTTTGGCATGTTCTCAGACCAAATAGTTGAGAGCACAAAAAGCAATGCTTCTGTTGCCGAGCCAAAGGACTGTTACTTATTTTACTGTGAAACTGATTCAAGAAATGAGGACCAATCAAAGTCTCTCTCCACGGATTTGCCTCCACAGCAGGAGAAAGTAGATAGGGAAGCTTCTGTGGAGCTTTGCGGTAAGCAGTTGCAACAAGTTACCCTGCTGCATCCTCAGACTGAAATGCTCCTGCAAATGCATACTCTGCCCGGACCTACACAACCCACAATAACAGTACAGGAGGCAACCTCGTCCACACCTCAGTTGCCTCAGGTTCATCTTCTGCAGCCCAGTTTGGGCCTTCATACGAATCTACTCCTTCCAGATGTGGCCATGAGAGAGGGAAATGTGacacaaaatgaaccagagTGGGGAAATCAGATATATTGGGTGCAAGAAAGAACAGATAGACATTTAGTGCTGGTACCTGTTCCTGCtagaaaaagtgaaaagagTGGGGTCAGTGTTGACAGTGGGCTTCAGAATACAGATACTCAGTCGATACTGGTGACAGAAGAAAGCTTCCAACAAAGAGTCAGTGAAGAGGGGTATAACGAAGCAGAAGGGTTCAGAAATTCTGCCTTGAGAAACTGTCCAAACAGCCATCCGTCAAATGTGAGAGCTACAGTGGTAAGTGGAGATGTGAGACAGAGACTGAAGGAACATCTGGAGGGGTTTCATCTGCAACTTACCAATGAATTTACTGACTGAATAAGGTGTTTTTTACAATTGTCTTTGACTCGTGAATATGaatcaaatcattaaacacAATGCTATCACTGTTTCAAA
>XM_022683064.1
CGCGCACACGTATTGTGCTGTGTCCCTAACGCGCATGCGCACAACTATAAAGGAAGAAGACGACAGCCATCTTCGTGAGGTCGAAACGCTCAGTGATGCCCAGACATTGCTCTGCCGCTGGCTGCAACTCACGTGACACCAGAGAAGCTCGGAAATCTGGTCTCACTTTTCACAGgTTGCCAAAAAGAGGCAATCCTCGGCGTGCTACCTGGATTCTTAATTCTTGTCGCAAAGGTCCGGAGGGCAAAGGGCAGTGGGACCCTCAGAGTGACTACATCTATTTTTGCTCCAAACATTTCACCCCTGACAGCTTTGAACTCTCTGGGGTCAGTGGCTATCGCAGACTAAAAGATGATGCAGTACCCACCTTGATTGAAGCCCCAGCTTACCAAAGAGGAAAGAGCTCCAAAGCAAAAGGCCGGGCACATCATGTGGAAAAACAGAAAAGAGCAAGTAGTGGAAAAGGGAAACTAAAGAGCAAGGACACTTCAGTCAGTGATGCTTTCGTACAGAATGCAACTGCAGTTGATGAAGCTGAACACTCCAGCACGATAAATGGGGAAAATGGAAATGAGCAAAGGACTTCACTTTTGTTTCAAGATGTTCAAACTAATAAGATATCATCACAAGGTCAACCAACAGATGAACCCACCCCTGAACAAACATCCCCACGACCACCTTCTCCATCCTGCTACATGAGGCGTCTCCCCCCACCTCCTGGCTTTTATCTGGCCAAAGAGCACAACTATGCTCAGCTCTGCCCATTGGTGTGGCGTAAACGTTATGACAAAGCTATCGACAACTTGGAGAAAGCTCTACGTCTGCTTAGTGCTGCCCGCCGCCGGGAAAACCGTCTGCGGCTCACCCTTCTTCGCCTTAGAGAGCACAGACTAAAGAGCACTTTATCCCGGACTCCAGACAGTGGCCAAAGGAAGGAGGGTCGTGGGAGGCCTCGCCTTTCTGCTCCACTGAGTGGAAAAACTGCAAGAGCAGACTTAAGTGGGCTGGAAGAGAATGAGATAGAGGGTGCGCCAGAAGACATGGATATTTTCACAGAAGAAGGTTGGAGACGGCCAACACCAACAACAAAAGAGAGGGCACCTGTAGAAGAGGAGGAAggatgctgtttttattgtggACGAGGTAGAGAAGACGAGGAATCCAAAGAAGTGCGGGATAGAAGACAGTGTCTCAGAGCCACAGAAACCCAAGTGTCCCATGGCAGTTCTAAACTGAGGAGAATTCAGAGAGGTAAAAGTGGAAAGACGTTTGGCATGTTCTCAGACCAAATAGTTGAGAGCACAAAAAGCAATGCTTCTGTTGCCGAGCCAAAGGACTGTTACTTATTTTACTGTGAAACTGATTCAAGAAATGAGGACCAATCAAAGTCTCTCTCCACGGATTTGCCTCCACAGCAGGAGAAAGTAGATAGGGAAGCTTCTGTGGAGCTTTGCGGTAAGCAGTTGCAACAAGTTACCCTGCTGCATCCTCAGACTGAAATGCTCCTGCAAATGCATACTCTGCCCGGACCTACACAACCCACAATAACAGTACAGGAGGCAACCTCGTCCACACCTCAGTTGCCTCAGGTTCATCTTCTGCAGCCCAGTTTGGGCCTTCATACGAATCTACTCCTTCCAGATGTGGCCATGAGAGAGGGAAATGTGacacaaaatgaaccagagTGGGGAAATCAGATATATTGGGTGCAAGAAAGAACAGATAGACATTTAGTGCTGGTACCTGTTCCTGCtagaaaaagtgaaaagagTGGGGTCAGTGTTGACAGTGGGCTTCAGAATACAGATACTCAGTCGATACTGGTGACAGAAGAAAGCTTCCAACAAAGAGTCAGTGAAGAGGGGTATAACGAAGCAGAAGGGTTCAGAAATTCTGCCTTGAGAAACTGTCCAAACAGCCATCCGTCAAATGTGAGAGCTACAGTGctgccattttggagatacaacgATTTTGCACAATACTGGTGTAAGTATACTTAGATATGCCATATCCTTGCTAAACAAAGATATTTG

Function

GO: NA

KEGG:

id description
K23208 THAP7; THAP domain-containing protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007254716.3 True 2105 mRNA 0.47 5 13089517 13094211
XM_022683064.1 False 2033 mRNA 0.48 6 13089517 13094495

Neighbor

gene id symbol gene type direction distance location
LOC103041798 NA coding upstream 1591 13085746 ~ 13087926 (+)
LOC111195512 NA coding upstream 16860 13070483 ~ 13072657 (+)
LOC111195511 NA coding upstream 46082 13041191 ~ 13043435 (+)
LOC111195514 NA coding upstream 58627 13028908 ~ 13030890 (+)
LOC103030274 NA coding upstream 90010 12997589 ~ 12999507 (+)
LOC103031854 NA coding downstream 4542 13099037 ~ 13112053 (+)
LOC103032168 zgc:64022,LOC108441816,LOC107745031,LOC107550074,LOC107563933,LOC107748382,LOC107683352,LOC106569877 coding downstream 20006 13114501 ~ 13115971 (+)
chtop chtop coding downstream 195219 13289714 ~ 13298879 (+)
LOC103042102 LOC108441815,LOC105906352,LOC107748379,LOC107550076,LOC106588678 coding downstream 207400 13301895 ~ 13319691 (+)
LOC103036187 LOC103036187,LOC108441814 coding downstream 344997 13439492 ~ 13447223 (+)
G197213 NA non-coding upstream 56227 13032083 ~ 13033290 (+)
G197206 NA non-coding upstream 92642 12994832 ~ 12996875 (+)
G197199 LOC108442976 non-coding upstream 147233 12941852 ~ 12942284 (+)
G197198 NA non-coding upstream 148435 12940314 ~ 12941082 (+)
G197197 NA non-coding upstream 150876 12938357 ~ 12938641 (+)
G197227 NA non-coding downstream 2057 13096552 ~ 13096872 (+)
G197230 NA non-coding downstream 18996 13113491 ~ 13113692 (+)
G197308 NA non-coding downstream 46674 13141169 ~ 13141482 (+)
G197309 NA non-coding downstream 49488 13143983 ~ 13144700 (+)
G197305 NA non-coding downstream 67798 13162293 ~ 13187854 (+)
s100a14 s100a14,LOC108442988 other upstream 125168 12956670 ~ 12964349 (+)
LOC103029421 NA other upstream 160990 12889358 ~ 12928527 (+)
G197106 NA other upstream 315021 12715368 ~ 12774496 (+)
grhl2 grhl2,LOC107748368,LOC107550099,LOC107738316,LOC107698657,LOC107672862,LOC107552317 other upstream 1343282 11687399 ~ 11746235 (+)
polr2k NA other upstream 1534934 11551660 ~ 11554583 (+)
G197334 LOC108441809 other downstream 229891 13324386 ~ 13362658 (+)
rpa3 NA other downstream 1182296 14276791 ~ 14293068 (+)
tac1 tac1 other downstream 1371770 14466265 ~ 14468882 (+)
G197665 NA other downstream 1699925 14794420 ~ 14796728 (+)
LOC103030137 prrc2a,LOC101471845,LOC102784426,LOC102311189 other downstream 2667428 15761923 ~ 15789854 (+)

Expression


Co-expression Network