LOC103036495


Basic Information

Item Value
gene id LOC103036495
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 13454703 ~ 13463236 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007254733.3
aaaaattgtatgttttattagGATTGTGTGTCATTGTTCTACATACACGTGGAGTCACTCTTTTCATGGGAAGCACATTGTGTTAGCTGACACGGTGTGAATTACTAGAGGACGTGTCTGAGGAATGATTTATGACATAAGAGGAACGTGGGGAGGGCGTTCCCGTGACCAAGTTCAAGGTAGAAGCTTCTTTCGGTTTGTGCTCGGAGTATATAGTCTGTCTCAGACGCCTGTAGAAACAGTTATTTACAGATTGGGACGAGCcgatactgtgtgtgtttttttttttattttatcatggaAGAAGGCATTCCTTTCCATTTACCTGTAAAAGCTAGTTTGTTTTCACTACttggttcattttttttctgtctggaTGTGGCTTTGGACGTGTGGACAATTGTGTCGCTGTATAAGGAGCAGGAGTATGTCTACATGGGATTGCTAatagctctgctgctgctctcctCAATCCTAGTCCAGGTCTTCAGCTGGATCTGGTACAAAGAGAAGAACATGGAAACCAGCACAGACAAATTTGCAGAAAAATACAATTTGATAGGACCGCTGCACTTCTTGCAGTTGGGAGTGTTTCTCAGGTGTGCCAGTTTGGTGGAACTCTCCATCCGCAAAGTTTTAAAATTTGATATTTTCCAAGAAGCAGTAGCTGTGCATCTGAAGCATGACCTCAGTATGCTGCGTCTGTTTGAGACGTTCTCTGAAAGCATCCCGCAGATCGTTCTCATGATCACCATCATCATGCAGGAGCAGGAGCTGCAGCTTTTTACAGgtttcaaAGTTGCTGTTTCATTCCTTATGCTTGCCCTTACTGTGATGTCGTACCATCGACACATGCGTGAGTTTGTTCCTGAGGACAAGAAAATGAACTGGCTCTCGTCTGGGGCTTTCTTCCTGTGGAACCTGTTCCTGATTACCCCGCGGGTGGTTGCTGTGGCCCTCTTTGCCTCCGTCCTGCCTTGCTTCATCGCCGTTCACTTCCTGTGTCTGTGGTTGCTGCTGGTTCTTTGTGTCTGGAGACAGAAGACGGACTTCATGGAAAATGCTGCAGGTGAATGGCTCTACCGGGCCACTGTAGGACTTATCTGGTACTTCAGCTGGTTTAATGTATCAGGCAAGAACACCAGAATCAAGAGGATCCTTTACCATGTGTTAATGGGGGCCGACACGGCTCTTCTATTGGTGTTGTGGTTTTGGAGAACATCCGTGGAATCAGCTTGTAGGAATCCTCTACCCATTAATCCCTACGTACTGCTCGTGGCACTGCCTGTGCTTTACATTATCGGCCTCCTGCTGAACCTGCTTTACTACTGGAAATTCCATCCCAAGAGAGAAAAAACGCCACGGTTAAGGTCAGCTTCTGTGGGGCTGCTGGACACAGATTCGGCTGCAGAAACTCCACAGACTGGTGTCCATAAGAGGATGAAAAACATGGATAATAATTTTTGGTAATATTTTTATGGTTTTCTAGACCCAAATAAAACAAGTCTTGATAggatttttattgttaaatcaGCCCAATTGTTACACAGCCTAATGCATATATGACTATATGCAGGCTAGACTCTTATCAGTTTCTCCTTTTTTTACAAACTACATGCAAGTTCTGGATGCAATGGGTTCCTTATAGTAGTATTTTATTTGTGAggtgttgatgttttttttttatcactttatgtatttattagatGTTTGTGTCATACTTGCTCATTTTATGCTGCTTATCTATATTTAAATTAGCGATATGCCACTATGAGACCTGAGAGAGTGGatcatacagtattttttttttttaaacgtagAGTATATTACAGTAACTGATAggtggaaacaataaaaaaaagttcatttattatctttattgtAATTTCACAAATGTTTCATATCACTATTCATACAGTAGGCTGCCCTAGCTACAGTGGATTTAGCTGTTAgctacagtaatatttcaggagaTGGGGATTGATAGTATGCTTTGATTCATACTATACTATCAATTGTCAAACCCATCCCTGCACCCTTGCAAATAAGTACTGGTATGTCTGTGTGCTTTTACAGTGCAGGTGTTGCATTTCCTTGTCAGGATTTTCTATAATTTGTAACTTATTTACATATAGCCATTGCTTATCCACCAGTCCTAGCTTAgcctttctttgtttttagctGTTAGCTGTGGCTCCTTCCTAGCCTCAGTTTAAGCTTTTAGCTTTTGCTGTTTTACATTTGAAATATTCTTTAGTCTTGATTTTTGTTGAATTCTTTTTGAAGAGGTTTACCTCGTCAGACATTGTCTCAAATACTACACTAGTGTAGCATTCTTAGCAGTATTTATTTCATAAGTGTGTATTTTGTATAGCTGTAAAAGCCACAtttataattttgtattttgtgctgTTTACAGGTTTAATTACTTGCTACACaataatcataatttattattacaggGAACATTTcaggttaaaataaaataaaataaatttataatgAACCTCGCCTCACCTCAATACACACCTTCTCAGGTATTGGTTTCAAACATCATTCAGTTCTGAAGATCAGTATGATGCTCATTAATctgcacatttaaatatttataaaatatcatTACAAGTTcctagtttaaatgttttactctTATACTACTATTGATACTGtggtgtgaaatgtttttttcctctggAGGAAAATGGAAAGTGCAATAACATCAGCAGGACCTGCAAATGTGCACTCAAAGGATTACATGAAGAGTTCACAGATAAAGAGcttaaatgtacattttctaCAGGAGAACATCTCAGTGGACATATGCATTTAtcttattaatgtgtttttaattatgttcatttgtattttgtatttagttaAATAAGCTATGaacccatttaaacatactttatgtattaaaaaaaaaaagtttgactaTTGATATTCatcatttctatttttattaaggAAAGGGTTTCTCACATTTTCTTTGAATTTCATTGCAGATGTTACAGGTCATCAAAAAATCTTATTCTTTTGTTTATTCTGTTGTTAAAAATCACTGCATAAAATCGGTTGATCgcagttttgtggtatatcaccatattattattaaaattaataaaataaaatgaacttaTTAACACAAATGTGATCACATTTTGTGAGTTCATTTCCCACTTCTAGTACATTAACACTGTCTTGGGTGGATCTTCTAACTTCCCCAAACTGAATATCAGTGGTTGGGGTCAGAGTGGGACTGGGAAAACTATGCACCATTGCAGGGTCATCCACTTGACTGGTGCAGTAGGTTTCGGTGTAGAACACGTGACTTTGACTCATcattttgaggtgttatcttgtataCGGGGGTTTTCAGACTCTCTTCTCCTTATTACTTTTAGATTTCTTTTTTCCACGTGCACGGGATCTATTTTCAGATGCAATGCAGTAAGCCTCAGCCAATCTCTATCTCCATTTCTCAGCATAACTTATTGGGGTCTGAGCCTCTTCATCTACCTCCAGAATAAAAGGACGTAAACTCTGAGACATAgacggtatata

Function

GO: NA

KEGG:

id description
ko04978 Mineral absorption

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007254733.3 True 3564 mRNA 0.38 3 13454703 13463236

Neighbor

gene id symbol gene type direction distance location
LOC103036187 LOC103036187,LOC108441814 coding upstream 7480 13439492 ~ 13447223 (+)
LOC103042102 LOC108441815,LOC105906352,LOC107748379,LOC107550076,LOC106588678 coding upstream 135012 13301895 ~ 13319691 (+)
chtop chtop coding upstream 155824 13289714 ~ 13298879 (+)
LOC103032168 zgc:64022,LOC108441816,LOC107745031,LOC107550074,LOC107563933,LOC107748382,LOC107683352,LOC106569877 coding upstream 338732 13114501 ~ 13115971 (+)
LOC103031854 NA coding upstream 342650 13099037 ~ 13112053 (+)
LOC103042421 NA coding downstream 63 13463299 ~ 13468103 (+)
LOC103043039 NA coding downstream 196651 13659887 ~ 13666328 (+)
LOC103039331 si:dkeyp-92c9.3,LOC108273295,LOC107672858,LOC107702514,LOC106570358,LOC107738593,LOC108411155,LOC107731552,LOC107571466 coding downstream 207107 13670343 ~ 13794112 (+)
LOC103030231 NA coding downstream 439531 13902767 ~ 13905038 (+)
LOC111195557 NA coding downstream 523801 13987037 ~ 13988938 (+)
G197331 sept7,LOC108441798,LOC108272655 non-coding upstream 16199 13378047 ~ 13438504 (+)
G197325 snapin,LOC106569889 non-coding upstream 170186 13281682 ~ 13284517 (+)
G197317 NA non-coding upstream 214530 13237460 ~ 13240173 (+)
G197305 NA non-coding upstream 266849 13162293 ~ 13187854 (+)
G197309 NA non-coding upstream 310003 13143983 ~ 13144700 (+)
G197406 NA non-coding downstream 103132 13566368 ~ 13567811 (+)
G197410 NA non-coding downstream 122997 13586233 ~ 13605958 (+)
G197411 NA non-coding downstream 125769 13589005 ~ 13593041 (+)
LOC103039008 NA non-coding downstream 190448 13653684 ~ 13658653 (+)
G197459 NA non-coding downstream 254050 13717286 ~ 13718002 (+)
G197334 LOC108441809 other upstream 92045 13324386 ~ 13362658 (+)
s100a14 s100a14,LOC108442988 other upstream 490354 12956670 ~ 12964349 (+)
LOC103029421 NA other upstream 526176 12889358 ~ 12928527 (+)
G197106 NA other upstream 680207 12715368 ~ 12774496 (+)
grhl2 grhl2,LOC107748368,LOC107550099,LOC107738316,LOC107698657,LOC107672862,LOC107552317 other upstream 1708468 11687399 ~ 11746235 (+)
rpa3 NA other downstream 813555 14276791 ~ 14293068 (+)
tac1 tac1 other downstream 1003029 14466265 ~ 14468882 (+)
G197665 NA other downstream 1331184 14794420 ~ 14796728 (+)
LOC103030137 prrc2a,LOC101471845,LOC102784426,LOC102311189 other downstream 2298687 15761923 ~ 15789854 (+)
ppp1r11 ppp1r11,LOC107694341 other downstream 2858706 16321942 ~ 16330240 (+)

Expression


Co-expression Network