lrrc69


Basic Information

Item Value
gene id lrrc69
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 21401489 ~ 21406189 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022683173.1
TCACACAAATTCCACAGCAACTTTATGATTTAATACAACTGAGGAAACTCTGTTTGGCGAGGAACAGTCTGAAAGATTTACCAGAGGGCATTCTTGGATGGGAAAATCTGAAGACTTTAGATGTTGCTGGAAATCACCTGTCTATGTTTCCAGCTGATTTCCAGTTTCTTGCACTGGAGGAGTTGTTCTTTGAGGGAAACAACTTTGTACAGTTTGAGCTGTTTGAGTCCTTTCGAGTGCAGGAAGTCTTTTCATTAAAGGAGCTTGCTGCCAGGCTCATCCTGAAAGAAGGCATGAATAAGCTGTCTGTGCTGTCCAGAGCTCTCCCGCTTTACCCTGATCTGCAGACCATGCTGTCTCGCTGGGGCAGGTGTGCCTTGTGCTTCCAGCGTTTCCTCACCACCTGGCTGGAGTGCGTGCAGTTCATCAACCTCCGAAAGGACATGAGTTTGAAAAGCTCACAGATTGTTCCAGTGCGGGTCCTGCTGTGCTCATATTCCTGCTTCAGCAAGAGTGGTCACTcatactatggtgttgctaaagtcTAACAAGTATGACAATTCATTTAAGGCGTCTCTTGCTTTGTTCAGTTGTACATTGTTTCCATGATGTGTAGTTTGTAGTCATATAATATTCTGCCACTAGATGGCAATGTTTGATCAGTGACCAGTCTTGCATGGTGATGAAATTTAGTCTGCACTGGGAAAGTCTCTAACAATACATCAGTGCAGGTGTATCAGCTGAAATCTTGCCAGATTTAGACATATGTTCTTTATAAAATTGTAGAAttgcactattattattagtattagtattagtagtagtagtaatgataTTGGAGCTATTACAAGTAATGTAAAGTACTGTGCTGTATGGTTTTAGTCAGCCTTAGTCAGTCAGTTTTAGTCAGTCAtcacattatttaaaaccaTGCATCTCACCTAATCACATTAGAGCAGTTGAAAGAAAACATAAATGCAGAAAAATGTAACAAGACTTTCCTATATTGAAGAAAATAGTTGAGATCTTTTAAGCTAGTCTGAAAGACAAAGCTTGTTGCCAGATTTCTTCTGGATACCCCAGACAGTGGTGTGTTTGTACAGTTCCATCAATAGCTTACCTGATTTTACGTCAATCAAGCACTAATTTATCAAACCAGGTGTTGAATGATGattttaaataacattagaCTTTAATGAGAAGACCTTTTAATGAATGTAGTAAACAACTACATTGTAAGAACAGATAAACCTTCACTGcccataaaatatgtttttttgtattctaaTTTTCAACATTTTGGTATTTCCATTAACATGTTCTGAATAGTTAATTATGAAATATCGTAAATAAACAGCGGCATTTATTGGTGCCATATAATTatctaaaatattacaaatttagGATATAAATGCTGTTCAGATATAATAACATCTCAAcagcatttaatttaaaatatgcatttttgtCTTGACTTCAAGAGTGTATAGTTTTACTCTTATGTAGTAAGacactcattatttttttaaccagtgATGGTATTAATGTTAAACAGAACTTCTAATACATATTGGAAAATGATCACTTATGATTTTTGAGGTCCTGCAGACTTTCTTTCATCAAGGGTGTGTGgtcatgtttaataaatgtaaaaacctTTTTTAGGTTTATGTGACTAA

Function

NR:

description
PREDICTED: leucine-rich repeat-containing protein 69

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022683173.1 True 1679 mRNA 0.36 5 21401489 21406189

Neighbor

gene id symbol gene type direction distance location
otud6b otud6b,LOC107556329 coding upstream 5961 21390138 ~ 21395528 (+)
LOC107197622 LOC107197622 coding upstream 45154 21351562 ~ 21356335 (+)
LOC103038471 sfpq,LOC107669930,LOC107722137,LOC107566770 coding upstream 50392 21330005 ~ 21351097 (+)
lpcat1 lpcat1,LOC107754844,LOC107694330 coding upstream 1087508 20276631 ~ 20313981 (+)
LOC103030452 irx4 coding upstream 1146709 20249200 ~ 20254780 (+)
fam92a fam92a1,LOC107710198,LOC107653841,LOC107556364,LOC107702073 coding downstream 454389 21860578 ~ 21872452 (+)
LOC103033932 LOC108424940 coding downstream 525607 21931796 ~ 21944254 (+)
LOC103030765 klhl38a,LOC103030765,LOC108424967,LOC107724354,LOC107565193,LOC107702087,LOC108272409,LOC105907674 coding downstream 628996 22035185 ~ 22042547 (+)
azin1b azin1b,LOC108425019,LOC108256938 coding downstream 735267 22141456 ~ 22148362 (+)
LOC103028967 rrm2b,LOC108425040,LOC107702093,LOC107556385,LOC107724293,LOC107565196,LOC108256937 coding downstream 744180 22150369 ~ 22159424 (+)
G198881 NA non-coding upstream 2489 21398732 ~ 21399000 (+)
G198848 NA non-coding upstream 310458 21090756 ~ 21091031 (+)
G198842 NA non-coding upstream 341277 21060000 ~ 21060212 (+)
G198839 NA non-coding upstream 354600 21046592 ~ 21046889 (+)
G198830 NA non-coding upstream 469965 20931218 ~ 20931524 (+)
G198939 NA non-coding downstream 154813 21561002 ~ 21561215 (+)
G198943 NA non-coding downstream 213449 21619638 ~ 21619845 (+)
G198947 NA non-coding downstream 250227 21656416 ~ 21656764 (+)
G198965 NA non-coding downstream 399285 21805474 ~ 21805739 (+)
G198968 NA non-coding downstream 414786 21820975 ~ 21841828 (+)
LOC103037930 NA other upstream 18489 21358464 ~ 21383000 (+)
G198815 NA other upstream 598599 20802371 ~ 20802890 (+)
mrpl36 mrpl36 other upstream 1126635 20273021 ~ 20274854 (+)
fndc5 fndc5b,LOC108433842,LOC108272379,LOC107691512,LOC107584283,LOC107687074 other upstream 1312502 20053028 ~ 20088987 (+)
G198540 NA other upstream 2154093 19246972 ~ 19247396 (+)
G199091 stk3,LOC105907728,LOC107724280,LOC107702102 other downstream 813076 22219265 ~ 22223036 (+)
znf704 znf704,LOC107702114,LOC107555575,LOC107696217 other downstream 1424042 22830231 ~ 22869257 (+)
ndufs5 ndufs5 other downstream 4211739 25617928 ~ 25620135 (+)
c23h18orf21 LOC103027551 other downstream 5180050 26586239 ~ 26613188 (+)
cdk6 cdk6,LOC107667775,LOC107567973,LOC107722162,LOC107558583,LOC106588946 other downstream 5425765 26831954 ~ 26892623 (+)

Expression


Co-expression Network