Item | Value |
---|---|
gene id | clasp2 |
gene name | clasp2 |
gene type | coding |
species | mexican tetra (Astyanax mexicanus) |
category of species | ornamental fish |
Item | Value |
---|---|
chromosome id | NC_035919.1 |
NCBI id | CM008322.1 |
chromosome length | 38085671 |
location | 28808329 ~ 28874267 (+) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
symbol | description |
---|---|
clasp2 | Predicted to enable microtubule plus-end binding activity. Predicted to be involved in several processes, including exit from mitosis; microtubule cytoskeleton organization; and regulation of microtubule polymerization or depolymerization. Predicted to act upstream of or within cell division. Predicted to be located in microtubule; ruffle membrane; and trans-Golgi network. Predicted to be active in basal cortex; kinetochore; and microtubule cytoskeleton. Orthologous to human CLASP2 (cytoplasmic linker associated protein 2). |
description |
---|
CLIP-associating protein 2 |
id | description |
---|---|
K16578 | CLASP1_2; CLIP-associating protein 1/2 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_022683252.1 | True | 5721 | mRNA | 0.54 | 44 | 28808329 | 28874267 |
XM_022683253.1 | False | 5718 | mRNA | 0.54 | 43 | 28808329 | 28874267 |
XM_022683254.1 | False | 5700 | mRNA | 0.54 | 43 | 28808329 | 28874267 |
XM_022683255.1 | False | 5697 | mRNA | 0.54 | 43 | 28808329 | 28874267 |
XM_022683256.1 | False | 5694 | mRNA | 0.54 | 43 | 28808329 | 28874267 |
XM_022683257.1 | False | 5694 | mRNA | 0.54 | 43 | 28808329 | 28874267 |
XM_022683258.1 | False | 5679 | mRNA | 0.54 | 43 | 28808329 | 28874267 |
XM_022683259.1 | False | 5673 | mRNA | 0.54 | 42 | 28808329 | 28874267 |
XM_022683260.1 | False | 5673 | mRNA | 0.54 | 42 | 28808329 | 28874267 |
XM_022683262.1 | False | 5666 | mRNA | 0.54 | 42 | 28808330 | 28874267 |
XM_022683263.1 | False | 5664 | mRNA | 0.54 | 43 | 28808329 | 28874267 |
XM_022683264.1 | False | 5661 | mRNA | 0.54 | 42 | 28808329 | 28874267 |
XM_022683265.1 | False | 5658 | mRNA | 0.54 | 43 | 28808329 | 28874267 |
XM_022683266.1 | False | 5645 | mRNA | 0.54 | 41 | 28808330 | 28874267 |
XM_022683267.1 | False | 5639 | mRNA | 0.54 | 42 | 28808330 | 28874267 |
XM_022683268.1 | False | 5631 | mRNA | 0.54 | 41 | 28808329 | 28874267 |
XM_022683269.1 | False | 5612 | mRNA | 0.54 | 41 | 28808330 | 28874267 |
XM_022683270.1 | False | 5603 | mRNA | 0.54 | 40 | 28808330 | 28874267 |
XM_022683271.1 | False | 5549 | mRNA | 0.53 | 42 | 28808330 | 28874267 |
XM_022683272.1 | False | 5542 | mRNA | 0.54 | 39 | 28808331 | 28874267 |
XM_022683273.1 | False | 5507 | mRNA | 0.53 | 41 | 28808330 | 28874267 |
XM_022683274.1 | False | 5503 | mRNA | 0.54 | 39 | 28808331 | 28874267 |
XM_022683275.1 | False | 5479 | mRNA | 0.54 | 38 | 28808331 | 28874267 |
XM_022683276.1 | False | 4322 | mRNA | 0.55 | 38 | 28834973 | 28874267 |
XM_022683277.1 | False | 4220 | mRNA | 0.54 | 38 | 28831921 | 28874267 |
XM_022683278.1 | False | 4345 | mRNA | 0.54 | 39 | 28823913 | 28874267 |
XM_022683279.1 | False | 5615 | mRNA | 0.54 | 41 | 28808330 | 28874267 |
XM_022683280.1 | False | 5548 | mRNA | 0.54 | 39 | 28808331 | 28874267 |
XM_022683281.1 | False | 5545 | mRNA | 0.54 | 39 | 28808331 | 28874267 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
fbxl2 | fbxl2,LOC107696556,LOC107742856,LOC107706183,LOC107591618,LOC107669511 | coding | upstream | 5611 | 28784642 ~ 28802718 (+) |
crtap | crtap,LOC107593591,LOC107706152,LOC107670137,LOC107742876,LOC107591617,LOC106588754 | coding | upstream | 52870 | 28747087 ~ 28755459 (+) |
LOC103028750 | LOC108424743 | coding | upstream | 108549 | 28681071 ~ 28699780 (+) |
LOC103028128 | NA | coding | upstream | 135882 | 28657320 ~ 28672447 (+) |
anp32e | anp32e,LOC107706176,LOC106569900,LOC107669588 | coding | upstream | 216142 | 28584404 ~ 28592187 (+) |
ubp1 | ubp1,LOC107706185,LOC107669383,LOC107696552,LOC107742855 | coding | downstream | 3303 | 28877570 ~ 28904102 (+) |
pdcd6ip | pdcd6ip,LOC107742851,LOC107591619,LOC107696546,LOC107706184,LOC107669307 | coding | downstream | 32255 | 28906522 ~ 28921254 (+) |
arpp21 | NA | coding | downstream | 58049 | 28932316 ~ 28952514 (+) |
LOC103031913 | fabp3,LOC107591627,LOC108426441,LOC107742844,LOC107696578,LOC107669374 | coding | downstream | 120617 | 28994884 ~ 28998485 (+) |
snrnp40 | snrnp40,LOC107591625,LOC107593559 | coding | downstream | 132288 | 29006555 ~ 29015003 (+) |
G200511 | NA | non-coding | upstream | 26295 | 28770134 ~ 28782034 (+) |
G200482 | LOC108426192,LOC108257078,LOC103472090,LOC106960294,LOC106931510,LOC103143289,LOC105893891,LOC107593550,LOC107706177,LOC107669544,LOC107696586 | non-coding | upstream | 63005 | 28703778 ~ 28745324 (+) |
G200490 | LOC108426231,LOC107706181,LOC107593552,LOC108257175,LOC107742858,LOC107669520 | non-coding | upstream | 70003 | 28736851 ~ 28738326 (+) |
G200488 | NA | non-coding | upstream | 79373 | 28726065 ~ 28728956 (+) |
G200402 | psmb4,LOC107731773,LOC107669568,LOC107591614,LOC107593590,LOC107696528 | non-coding | upstream | 129167 | 28672884 ~ 28679162 (+) |
G200628 | NA | non-coding | downstream | 144306 | 29018573 ~ 29019097 (+) |
G200780 | ppt1,LOC107697049,LOC107706207,LOC107589449,LOC107591677 | non-coding | downstream | 587894 | 29462161 ~ 29467527 (+) |
G200785 | NA | non-coding | downstream | 610673 | 29484940 ~ 29485686 (+) |
G200799 | NA | non-coding | downstream | 718753 | 29593020 ~ 29593537 (+) |
G200803 | LOC108426791,LOC101073009,LOC107696579,LOC107591646,LOC101165157 | non-coding | downstream | 761854 | 29636121 ~ 29640007 (+) |
G200341 | LOC108426039 | other | upstream | 612131 | 28193574 ~ 28196198 (+) |
LOC103032101 | NA | other | upstream | 820434 | 27978282 ~ 27987895 (+) |
G200235 | NA | other | upstream | 989679 | 27815336 ~ 27818650 (+) |
dync1i1 | dync1i1,LOC107731605 | other | upstream | 1068220 | 27634679 ~ 27740109 (+) |
LOC103023645 | gngt1,LOC103023645,LOC108257427,LOC103152523,LOC103362787,LOC107085869 | other | upstream | 1502743 | 27304521 ~ 27305586 (+) |
lypla2 | lypla2,lypa2 | other | downstream | 653796 | 29528063 ~ 29568075 (+) |
eloa | tceb3 | other | downstream | 668481 | 29542748 ~ 29552884 (+) |
rbm24 | rbm24,rbm24a,LOC107754275,LOC107592929 | other | downstream | 2135659 | 31009926 ~ 31084633 (+) |
G201018 | NA | other | downstream | 2138444 | 31012711 ~ 31015045 (+) |
G201207 | NA | other | downstream | 3067935 | 31942202 ~ 31987057 (+) |