LOC103025280 (LOC108430595,LOC108256942,LOC105899944)


Basic Information

Item Value
gene id LOC103025280
gene name LOC108430595,LOC108256942,LOC105899944
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 34206852 ~ 34244019 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022683374.1
TTAAGCCACCATGCCGGGCGCCTACAAAGGTGAGTGTGGGGACGATGTGGACCCCATGCCTTTCCTGGCTCCCCCGGAAAAGGAGAGACTGGAGGCCATGAACAGGCCCTATGACATCAAGAAGTCCTGCTGGGTGAAGCACGAGAAGGAAGGCTTCATCGCAGGAGAGATCCAGTCTGACGACGGTGATAAAGTCACTGTGAAGACGGTCAAAAACGCGACAGTCACTATAAAGAAGGATGACATTCAGCAGATGAATCCTCCCAAGTTTTATCAGGCCAGTGACATGGCTAACCTGACCTTTCTGAACGAGGCCAGCGTGCTGGAGAACCTTCGCTCTCGCTACGTCTATATGAGGATCTACACCTACTCCGGCCTTTTCTGTGTGACTGTAAACCCCTACAAATGGCTTCCTATTTACGGGGTGAAGGTCGCTCAGCTGTATAAGGGGAAGAAGCATGAAGTTCCCCCTCATCTCTTCTCCATCTCAGACAATGCATACCATGACATGATGATGGAGCACGAGAACCAGTCAATGCTGATCACTGGAGAATCCGGTGCTGGCAAGACTGAAAACACCAAGAAGGTCATCCAGTACTTCGCCAATGTTGGCGCCACTGGAGGAAAACCATCTTCAGATTCCAAGGGCTCCCTGGAGGATCAAATCATCCAGGCTAACCCAGTCCTGGAGGCGTTTGGTAACGCCAAAACCACCAGGAACAACAATTCCTCTAGATTTgGGAAATTTATCCGAATCCACTTTGGACCAACAGCTAAGCTGGCTGGTGCAGACATAGAAAGTTATCTACTGGAGAAATCCCGTGTGATCTCCCAACAAGCAGCGGAACGCAGCTATCACATCTTCTACCAGCTCCTGTCTGGGAAGAAACCAGAGCTGCTGGAGGCTCTCCTTCTGGTCGCGGACCCAAAACAGTATGTTTGGATCTGTCAGGGAGTCACGGTGGTGGATAACATGGATGATAAAGAGGAGCTGATGCTGACTGATATGGCGTTTGATGTGCTCGGCTTCACTGCTGAGGAGAAAATGAGCATCTACAAGCTGACCGGGGGCATAATGCACTTCGGTAACATGAAGTTCAAACAGAAAGCAAGAGAGGAGCAAGCTGATGTTGATACAACTGAGGTGGCTGACAAAGTTGCCCACCTCATGGGGATCAACTCTGGGGATCTGCAGAAGGGGATCACCAGGCCTCGAGTTAAAGTTGGAAATGAGTTTGTGACCAAAGGTCAGAACCAGGACCAATGCATCTACTCCATTGGAGCTCTGGCTAAAGCCATCTACGACAGAATGTTCAAGTGGATGGTGAACAGGATCAATAAAACTCTGGACACAAAGATGCAGCGCCAGTTCTTCATTGGAGTTTTGGATATTGCTGGCTTTGAAATCTTTGAGTTTAATAGCTTCGAGCAGCTGTGCATCAACTTCACCAATGAAAAACTGCAACAGTTTTTCAACCACCACATGTTCGTCCTGGAACAGGAGGAATATAAGAAAGAGGGGATAGACTGGGTCTTCATAGACTTCGGACTCGACCTGCAGGCCTGCATTGAGCTGCTGGAGAAGCCAATGGGGATCTTTTCCATCCttgaggagcagtgtgtgttCCCCAAGGCCACAGATGTCACTTTTAAGACGGCCTTGTATGACAATCATCTGGGCAAGTCTGCCAACTTTCAGAAACCGAAAGGTGGTAAGAAAGGGCCGGAGGTTCACTTTGAGCTGATTCACTATGCCGGCACTGTCGGGTACAACATTGCAGGCTGGTTGGAGAAGAATAAAGACCCTCTGAATGAAACAGTGGTGGGCTTGTACCAGAAGTCCTCCATGTCTCTTCTAGCTCATCTCTTCAAAGAAGAGGAAGCTGCTGCTGGtgtcaaaaaacagaaaaagggcTCTTCCTTCCAGACCGTATCTGCTTTCTACAGGGAGCAGCTGAACAAACTGATGAGCACCCTGCGAAGCACGGCTCCCCACTTTGTACGCTGCATTGTACCCAATGAATTCAAGCAGTCtgGTGTTTGTGATGCAAATTTAATCTTGCACCAGCTGGCCTGTAATGGTGTCCTGGAGGGAATCCGCATTTGCAGGAAAGGCTTTCCCAATAGATTGCAGTACCCTGAGTTTAAGCAGAGGTATTACATCCTCAACCCCAATGTGATCCCAAAGGGATTTGTGGACAACAAAAAGGCCTCTGAGTTGATTCTAGGTTCGATTGGGTTGGACGATATGGAGTACAGGATAGGACACACCAAGGTGTTCTTCCGAGCTGGAGTCCTGGCTAAGCTGGAGGACATGCGGGATGAGCGGCTGGCTAAAATCATGACAATGCTGCAGGGGCGTCTGAGGGGCACACTCATGAGAGTAGAGTTCAAGAAGATGCTTGAGAGAAGAATTGCTCTCATTGCTCTTCAGAGAAACGTGAGGAAGTTCCTTCAGCTCAGATACTGGGGATGGTGGAAACTATACACAAAGgtcAAGCCTTTGCTGCACGTCGCTCGTCAGGAGGATGAGCTGAAGGCTAAAGAGGAAGAGTTACGGGTTGCCCTCGAGAAAACGGCAGAAATGACGGAAAAGATCAAAGAGCTGGATGAAAAACTCGTCACTCTGTCTAAAGAGAAGAGTGACTTGGCCTTAGCCCTGGCAGCTGAGCAAGACAGCATAGCCGACGCTGAAGAGCGCTGCAGCCAGCTGATGAAACAGAAGATGAACATGGAGGAGCAGATCCAGGATATGAAGGAgaggctggaggaggaggagggcagTGCTATGGCATTAAGTGCTCAGAAGCGCAAGCTGGAAGGAGAGCTTATGGACCTGAAGAGAGATCTGGAAGGCCTGGAGTCCACTCTGGCAAAGTCAGAGAAGGAAAAACAGGGCCTGGACAGCAAAGTGCGCTCTTTGACAGCCGAACTTGGTCAGAGGGACGATACCATTACCAGGTCCCAGAAGGAAAGAAAGGCTCTGGAGGAACTGCAACAGAAAACTCTGGACGACCTTCAAGCTGAGGAGGATAAAGTGAATCATCTCACCAAAACCAACAGCAAGCTCACCTCTCAAGTGCATGAGCTGGAAGATAACTGGGAGCAGGAGAAGAAAATCCGAGGAGAGGTGGAGAAGGCCAGACGCAAAGCCGAGGCAGATCTGAAGATGACCATCGATAACCTCAACGAGATGGAGAGAGCTAAAATAGACCTGGAGGAGGTTGTCAAAAAGAGGGACATGGAAATTAACCATCTGAACGCTAAACTGGAGGATGAGCAGTCTCTCAGCTCCACTCTGCACAGGAAGCTCAAAGAGCACCAGGCCCGCATcgaggagctggaggaggagctggaggcgGAGAGGGCAGTAAGAGCTAAGGTTGAAAAGCAGAGAGCAGATCTGTCCCGGGATCTTGAGGATCTTGGGGACAGACTGGAGGAGGCAGGGGGTGCCACTTTTGCTCAGATCGAGCAGAATAAGAAACGTGAAGCTGAGCTGATGAAGCTCCGCAGAGAGCTGGAGGAGGCGGCTCTGCAGTCCGAGGCCACTGCCTCCGCCCTGAGGAAGAAGCACTCGGACGCCATGGCGGAGCTGGGCGAGCAGGTAGAGAATCTACAGAGAGTCCGGATCAAACTGGAGAAGGACAAGCAGGTCATGAAGGCGGAGATTGACGACCTGAACGCCACGGTAGAGGCAGTGCAGAAATCCAAGCTGAACGCTGAGGCCCACGTCCGTAAGTTAGAGGACAGCCTGGCCGAGGCTAATTCCAGACTGGCAGAGATGGAGAGATCCCAGACTGAGCTCAATACCATCAAAATCCATCTGACAGCCGAGAACAGCGATCTCAGCCGTGAACTGGGGGAGGCACAGAGTAAGCTCAACCAGATTACACGGATCAAAACTTCACTGACCACCCAGAACGATGAGCTGAAAAGACAGGTGGACGAAGAGTCAAAGGCTCGAAGTGCAGCTGTCATCGGCCTGGCTAATGCTCAGCATGACCTGGACCTGATGAAGGAGCAGCTGGATGAGGAGCAGGAGGGCAAATCGGAGATGCAGCGCCTCATCTCCAAACTCAACGCAGAGGTGACCACCTGGAGAACCAAGTACGAGACGGATGCCATCCACAAAACTGAGGAACTGGAGGAGACCAAGCGTAAGCTGACTGTCCGGCTCCAGGAGGCAGAAGAAGCTACAGAAGCAGCTCAGGCTCGTGCAGCGAGTCTGGAGAAGGTCAAACAAAGGCTTCAGGGAGAAGTGGAGGATCTGACTATCGACCTGGAGAAGTCTaatgctgccgctgctgctctGGACAAGAAGCAGCGCAGCTTTGACAAGATGACTGCGGAGTGGAGTCAGAAGTGTGAGGAGATGCAGCTTGAGCTGGAGAACTCCCAAAAGGAATGCCGCACCTACATGACGGAGGTGTACAAACTTAAGACGTCTTACGAGGAATCACTCGACCATCTGGAGACTGTCAAGAAAGACAACAAGACCCTCTCTGACGAGATCCGAGATCTCATGGAGCAGCTGGGTGAGGGTGGGAAAAGTGTTCATGAGCTGCAGAAAGccaagaggaagctggaggtTGAGAGGGACGAGCTGCAGATAGCCCTAGAGGAGGCAGAGACCTCTCTGGagGTGGAGGAAGGTAAGGTGGTCCGAGTCCAGTTGGAATTGGCTCAAGTGAAAGCAGACATTGATCGCAGAATTCACgagaaagaagaagagtttGAAATCACCAGGAAAAACCACCAGCGTGCCATCGAGTCACTGCAGGCCAGCCTGGAGGCGGAGGCTAAAGGTCGCGCCGAGGCTCTGAGGATGAAGAAGAAAATGGAGTGTGATCTGAACGAGATGGAGATCCAGCTGGAACATGCCAACAAGAACAACAGCGAGCTGGTCAAATCCCTGAAGAGACTGCAGCAGCAAATCAAAGATATGCAGATGCAGATGGATGAAGATGCACGAGTGCACGAGGAGCTAAGAGAGCACTACAGCCTGCAGGAGCGCAGAGTCTGCCTGCTGCAGACAGAGATAGAGGAGCTGCGCAGCGGCCTGGAAGCTTCAGAGCGCTCCAGGAAGCTGATGGAGCAGGAGCTGGTGGACGTTACTGAGCGCCATAATGAGCTCTATTCCCAGAACCAGAGCTTAATTATTATCAAGCGCAAAATGGAAGCAGACTTGACTCGAGTCTCAAACGAGAACGAGGAGCTGATCAGCGAGTTCCGCTCTGCTGATGAAAGAGCCAAGAAGGCCATCACAGATGCAACCCGTATGGCGGAGGAACTGCGGCAGGAGCAGGACCACTGCATCCATCTGGAGAAGATAAAGAAGAACAATGAGCTGATGATCAAAGATCTGCAGCTGAAAGTGGAAGAGGCAGAGGAGCTAGCCTTAAAGTCAGGCAAACGTACCATCCAAAAATTAGAAGTCAGGGTCAGGGAGTTGGAGAGTGAGCTGGATGTGGAGCAGAAGAGACATGTGGAGACGGTGAAGGTCCTGCGTAAGAACGAGCGCCGCCTGAAGGAGCTGATCTTCCAGACTGAAGAAGACCACAAAACCAACCAGCGCATGCAGGAACTGGTGGAGAAACTGCAGAACAAACTCAAGTCCTACAAGAGGCAGATAGAGGAAGCTGAGGAGCAAGCCAACACAAGTCTGTCTAAGTACAGGAAGACCGTGCATGAGCTGGATGATGCTGAGGAGAGAGCGGGCAATGCTGAGATGGCTCTGAACAAACTCCGAACCAGGAATCGTGCTTCAGTGACCAAGGGCTTTACTAACGTAGAGATCGTGCAGATCTCTAAAACCTCCAAGAGTTCCTCAGAGGAGTAAGAGTTCTGACCCATGCAGGAGAGTGACGGACAGACCAGCACTCATTCCCCACTGGAAGACCTTCTACACAGCGGACGAGATTAGAGAGATTCACCGAAGTCTTAAAGCTAAACTGAAAAGTCTtaactagtgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgttgtactgtgTGTTAGATGAATGTGATGGGTTTGATCTGAAGCTGTGTAGAAATGGTCTTCAGTAATGGGGTCTGATTGGGGGAAGCTGCACTCTCATGTCAACGATAGAGGGTACACCTGTGTTTGTCACTCTCCTGTCATGAGAAAaaattatcaaaataaactTTAA

Function

NR:

description
PREDICTED: myosin-16-like

GO: NA

KEGG:

id description
K17751 MYH6_7; myosin heavy chain 6/7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022683374.1 True 6178 mRNA 0.51 43 34206852 34244019

Neighbor

gene id symbol gene type direction distance location
micall2 micall2,micall2a coding upstream 130339 34034500 ~ 34076513 (+)
LOC103027444 NA coding upstream 182650 34015702 ~ 34024202 (+)
ints1 ints1,LOC107703394,LOC107572041 coding upstream 208111 33939434 ~ 33998741 (+)
tmem184a tmem184a,LOC107581701,LOC107745595,LOC107674661 coding upstream 322207 33817531 ~ 33884645 (+)
LOC103025781 fscn1,fscn1a,LOC107581720,LOC107742378,LOC107674660,LOC107720060 coding upstream 858184 33334726 ~ 33348668 (+)
arpc1a arpc1a,LOC107674705,LOC107591778,LOC107720063,LOC107703414 coding downstream 2133 34246152 ~ 34256116 (+)
arpc1b arpc1b,LOC107720102,LOC107591785,LOC107674599,LOC107581715 coding downstream 12545 34256564 ~ 34271331 (+)
mmd2 mmd2,mmd2a,LOC107748164,LOC107674702,LOC107720066,LOC107581716 coding downstream 42068 34286087 ~ 34321859 (+)
card11 card11,LOC107592484 coding downstream 900256 35144275 ~ 35237634 (+)
gna12 gna12,gna12a,LOC107674729,LOC107758336,LOC107703403,LOC107753491 coding downstream 1019051 35263070 ~ 35336079 (+)
G201805 LOC107720062,LOC107581717,LOC107591759,LOC107674676 non-coding upstream 12611 34161445 ~ 34194241 (+)
G201800 NA non-coding upstream 128101 34078541 ~ 34078751 (+)
G201786 NA non-coding upstream 181399 34024322 ~ 34025453 (+)
G201722 NA non-coding upstream 299374 33816101 ~ 33907478 (+)
G201725 NA non-coding upstream 334315 33871849 ~ 33872537 (+)
G201830 NA non-coding downstream 63956 34307975 ~ 34309433 (+)
G201851 NA non-coding downstream 157578 34401597 ~ 34401908 (+)
G201824 LOC108257387 non-coding downstream 161602 34405621 ~ 34422325 (+)
G201859 NA non-coding downstream 190022 34434041 ~ 34436093 (+)
G201872 NA non-coding downstream 226287 34470306 ~ 34547849 (+)
psmg3 psmg3 other upstream 391866 33811432 ~ 33814986 (+)
G201466 LOC102799139,LOC107581721 other upstream 931945 33260173 ~ 33274907 (+)
bud31 bud31,LOC107737741,LOC107720055 other upstream 1228942 32974320 ~ 32977910 (+)
G201445 flii,LOC107581766,LOC107737969,LOC107703428,LOC107674686 other upstream 1278933 32923528 ~ 32927919 (+)
LOC103043810 ago4,LOC106511154,LOC103043810 other upstream 1919049 32269298 ~ 32287803 (+)
LOC111195488 NA other downstream 862019 35106038 ~ 35124618 (+)
G202336 NA other downstream 2345429 36589448 ~ 36940279 (+)
LOC103041887 NA other downstream 2739304 36983323 ~ 36993332 (+)

Expression


Co-expression Network