trnav-aac_47


Basic Information

Item Value
gene id trnav-aac_47
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 8947891 ~ 8947962 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnav-aac_47
gtttctgtagtgtagtggttatcACGTTCGCCTAACACGCGAAAGGTCCCTGGTTCGAACCAGGCAGAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnav-aac_47 True 72 tRNA 0.50 1 8947891 8947962

Neighbor

gene id symbol gene type direction distance location
trnav-cac_32 NA coding upstream 118 8947702 ~ 8947773 (+)
trnav-aac_46 NA coding upstream 307 8947513 ~ 8947584 (+)
trnav-cac_31 NA coding upstream 495 8947324 ~ 8947396 (+)
trnav-cac_30 NA coding upstream 685 8947135 ~ 8947206 (+)
trnav-aac_45 NA coding upstream 874 8946946 ~ 8947017 (+)
trnav-aac_48 NA coding downstream 117 8948079 ~ 8948150 (+)
trnav-aac_49 NA coding downstream 305 8948267 ~ 8948339 (+)
trnav-aac_50 NA coding downstream 495 8948457 ~ 8948528 (+)
trnav-aac_51 NA coding downstream 684 8948646 ~ 8948718 (+)
trnav-cac_33 NA coding downstream 874 8948836 ~ 8948908 (+)
G196314 NA non-coding upstream 16532 8931149 ~ 8931359 (+)
G196286 NA non-coding upstream 98265 8849360 ~ 8849626 (+)
G196259 NA non-coding upstream 144045 8803118 ~ 8803846 (+)
G196257 NA non-coding upstream 151505 8792633 ~ 8796386 (+)
G196238 NA non-coding upstream 166935 8741530 ~ 8780956 (+)
G196317 NA non-coding downstream 390107 9338069 ~ 9338819 (+)
G196329 NA non-coding downstream 429955 9377917 ~ 9427544 (+)
G196327 NA non-coding downstream 433788 9381750 ~ 9382549 (+)
G196396 NA non-coding downstream 659560 9607522 ~ 9608821 (+)
G196411 NA non-coding downstream 763928 9711890 ~ 9712641 (+)
G196232 NA other upstream 267921 8679284 ~ 8679970 (+)
LOC103033741 grik5,LOC108433750,LOC107549838,LOC107752523,LOC100331381,LOC107666346 other upstream 542422 8143873 ~ 8405469 (+)
G195793 NA other upstream 1654198 7293313 ~ 7293693 (+)
tapbp tapbp other upstream 1820777 7120612 ~ 7127114 (+)
LOC103021434 rxrba,LOC107566635,LOC107751683,LOC107694777,LOC107729870,LOC108272672 other upstream 2000735 6922288 ~ 6947156 (+)
mrps21 mrps21 other downstream 586467 9534429 ~ 9539648 (+)
LOC103046991 celf3a,LOC108437918,LOC107750801,LOC108272714 other downstream 655365 9603327 ~ 9638916 (+)
LOC103046684 LOC106605923,LOC107589412,LOC107582081,LOC107699547,LOC108429942 other downstream 752778 9700740 ~ 9704709 (+)
G196415 NA other downstream 772821 9720783 ~ 9721270 (+)
G196419 NA other downstream 792397 9740359 ~ 9740768 (+)

Expression


Co-expression Network