trnav-aac_48


Basic Information

Item Value
gene id trnav-aac_48
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 8948079 ~ 8948150 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnav-aac_48
gtttctgtagtgtagtggttatcACGTTCGCCTAACACGCGAAAGGTCCCTGGTTCGAACGAGGCAGAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnav-aac_48 True 72 tRNA 0.50 1 8948079 8948150

Neighbor

gene id symbol gene type direction distance location
trnav-aac_47 NA coding upstream 117 8947891 ~ 8947962 (+)
trnav-cac_32 NA coding upstream 306 8947702 ~ 8947773 (+)
trnav-aac_46 NA coding upstream 495 8947513 ~ 8947584 (+)
trnav-cac_31 NA coding upstream 683 8947324 ~ 8947396 (+)
trnav-cac_30 NA coding upstream 873 8947135 ~ 8947206 (+)
trnav-aac_49 NA coding downstream 117 8948267 ~ 8948339 (+)
trnav-aac_50 NA coding downstream 307 8948457 ~ 8948528 (+)
trnav-aac_51 NA coding downstream 496 8948646 ~ 8948718 (+)
trnav-cac_33 NA coding downstream 686 8948836 ~ 8948908 (+)
trnav-cac_34 NA coding downstream 876 8949026 ~ 8949097 (+)
G196314 NA non-coding upstream 16720 8931149 ~ 8931359 (+)
G196286 NA non-coding upstream 98453 8849360 ~ 8849626 (+)
G196259 NA non-coding upstream 144233 8803118 ~ 8803846 (+)
G196257 NA non-coding upstream 151693 8792633 ~ 8796386 (+)
G196238 NA non-coding upstream 167123 8741530 ~ 8780956 (+)
G196317 NA non-coding downstream 389919 9338069 ~ 9338819 (+)
G196329 NA non-coding downstream 429767 9377917 ~ 9427544 (+)
G196327 NA non-coding downstream 433600 9381750 ~ 9382549 (+)
G196396 NA non-coding downstream 659372 9607522 ~ 9608821 (+)
G196411 NA non-coding downstream 763740 9711890 ~ 9712641 (+)
G196232 NA other upstream 268109 8679284 ~ 8679970 (+)
LOC103033741 grik5,LOC108433750,LOC107549838,LOC107752523,LOC100331381,LOC107666346 other upstream 542610 8143873 ~ 8405469 (+)
G195793 NA other upstream 1654386 7293313 ~ 7293693 (+)
tapbp tapbp other upstream 1820965 7120612 ~ 7127114 (+)
LOC103021434 rxrba,LOC107566635,LOC107751683,LOC107694777,LOC107729870,LOC108272672 other upstream 2000923 6922288 ~ 6947156 (+)
mrps21 mrps21 other downstream 586279 9534429 ~ 9539648 (+)
LOC103046991 celf3a,LOC108437918,LOC107750801,LOC108272714 other downstream 655177 9603327 ~ 9638916 (+)
LOC103046684 LOC106605923,LOC107589412,LOC107582081,LOC107699547,LOC108429942 other downstream 752590 9700740 ~ 9704709 (+)
G196415 NA other downstream 772633 9720783 ~ 9721270 (+)
G196419 NA other downstream 792209 9740359 ~ 9740768 (+)

Expression


Co-expression Network