trnav-cac_14


Basic Information

Item Value
gene id trnav-cac_14
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 8937658 ~ 8937730 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnav-cac_14
gtttctgtagtgtagtggttatcACGTTCGCCTCACACGCGAAAGGTCCCTGGTTCGAAACCAGGCAGAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnav-cac_14 True 73 tRNA 0.51 1 8937658 8937730

Neighbor

gene id symbol gene type direction distance location
trnav-aac_11 NA coding upstream 118 8937468 ~ 8937540 (+)
trnav-cac_13 NA coding upstream 308 8937278 ~ 8937350 (+)
trnav-cac_12 NA coding upstream 498 8937088 ~ 8937160 (+)
trnav-cac_11 NA coding upstream 688 8936898 ~ 8936970 (+)
trnav-cac_10 NA coding upstream 878 8936708 ~ 8936780 (+)
trnav-aac_12 NA coding downstream 117 8937847 ~ 8937919 (+)
trnav-cac_15 NA coding downstream 306 8938036 ~ 8938107 (+)
trnav-cac_16 NA coding downstream 495 8938225 ~ 8938297 (+)
trnav-cac_17 NA coding downstream 685 8938415 ~ 8938487 (+)
trnav-aac_13 NA coding downstream 875 8938605 ~ 8938677 (+)
G196314 NA non-coding upstream 6299 8931149 ~ 8931359 (+)
G196286 NA non-coding upstream 88032 8849360 ~ 8849626 (+)
G196259 NA non-coding upstream 133812 8803118 ~ 8803846 (+)
G196257 NA non-coding upstream 141272 8792633 ~ 8796386 (+)
G196238 NA non-coding upstream 156702 8741530 ~ 8780956 (+)
G196317 NA non-coding downstream 400339 9338069 ~ 9338819 (+)
G196329 NA non-coding downstream 440187 9377917 ~ 9427544 (+)
G196327 NA non-coding downstream 444020 9381750 ~ 9382549 (+)
G196396 NA non-coding downstream 669792 9607522 ~ 9608821 (+)
G196411 NA non-coding downstream 774160 9711890 ~ 9712641 (+)
G196232 NA other upstream 257688 8679284 ~ 8679970 (+)
LOC103033741 grik5,LOC108433750,LOC107549838,LOC107752523,LOC100331381,LOC107666346 other upstream 532189 8143873 ~ 8405469 (+)
G195793 NA other upstream 1643965 7293313 ~ 7293693 (+)
tapbp tapbp other upstream 1810544 7120612 ~ 7127114 (+)
LOC103021434 rxrba,LOC107566635,LOC107751683,LOC107694777,LOC107729870,LOC108272672 other upstream 1990502 6922288 ~ 6947156 (+)
mrps21 mrps21 other downstream 596699 9534429 ~ 9539648 (+)
LOC103046991 celf3a,LOC108437918,LOC107750801,LOC108272714 other downstream 665597 9603327 ~ 9638916 (+)
LOC103046684 LOC106605923,LOC107589412,LOC107582081,LOC107699547,LOC108429942 other downstream 763010 9700740 ~ 9704709 (+)
G196415 NA other downstream 783053 9720783 ~ 9721270 (+)
G196419 NA other downstream 802629 9740359 ~ 9740768 (+)

Expression


Co-expression Network