trnav-cac_27


Basic Information

Item Value
gene id trnav-cac_27
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 8945428 ~ 8945500 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnav-cac_27
gtttctgtagtgtagtggttatcACGTTCGCCTCACACGCGAAAGGTCCCTGGTTCGAAACCAGGCAGAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnav-cac_27 True 73 tRNA 0.51 1 8945428 8945500

Neighbor

gene id symbol gene type direction distance location
trnav-cac_26 NA coding upstream 118 8945238 ~ 8945310 (+)
trnav-aac_39 NA coding upstream 308 8945049 ~ 8945120 (+)
trnav-cac_25 NA coding upstream 497 8944859 ~ 8944931 (+)
trnav-aac_38 NA coding upstream 687 8944669 ~ 8944741 (+)
trnav-aac_37 NA coding upstream 877 8944480 ~ 8944551 (+)
trnav-aac_40 NA coding downstream 118 8945618 ~ 8945690 (+)
trnav-cac_28 NA coding downstream 308 8945808 ~ 8945879 (+)
trnav-aac_41 NA coding downstream 497 8945997 ~ 8946069 (+)
trnav-aac_42 NA coding downstream 687 8946187 ~ 8946259 (+)
trnav-aac_43 NA coding downstream 877 8946377 ~ 8946449 (+)
G196314 NA non-coding upstream 14069 8931149 ~ 8931359 (+)
G196286 NA non-coding upstream 95802 8849360 ~ 8849626 (+)
G196259 NA non-coding upstream 141582 8803118 ~ 8803846 (+)
G196257 NA non-coding upstream 149042 8792633 ~ 8796386 (+)
G196238 NA non-coding upstream 164472 8741530 ~ 8780956 (+)
G196317 NA non-coding downstream 392569 9338069 ~ 9338819 (+)
G196329 NA non-coding downstream 432417 9377917 ~ 9427544 (+)
G196327 NA non-coding downstream 436250 9381750 ~ 9382549 (+)
G196396 NA non-coding downstream 662022 9607522 ~ 9608821 (+)
G196411 NA non-coding downstream 766390 9711890 ~ 9712641 (+)
G196232 NA other upstream 265458 8679284 ~ 8679970 (+)
LOC103033741 grik5,LOC108433750,LOC107549838,LOC107752523,LOC100331381,LOC107666346 other upstream 539959 8143873 ~ 8405469 (+)
G195793 NA other upstream 1651735 7293313 ~ 7293693 (+)
tapbp tapbp other upstream 1818314 7120612 ~ 7127114 (+)
LOC103021434 rxrba,LOC107566635,LOC107751683,LOC107694777,LOC107729870,LOC108272672 other upstream 1998272 6922288 ~ 6947156 (+)
mrps21 mrps21 other downstream 588929 9534429 ~ 9539648 (+)
LOC103046991 celf3a,LOC108437918,LOC107750801,LOC108272714 other downstream 657827 9603327 ~ 9638916 (+)
LOC103046684 LOC106605923,LOC107589412,LOC107582081,LOC107699547,LOC108429942 other downstream 755240 9700740 ~ 9704709 (+)
G196415 NA other downstream 775283 9720783 ~ 9721270 (+)
G196419 NA other downstream 794859 9740359 ~ 9740768 (+)

Expression


Co-expression Network