trnav-cac_30


Basic Information

Item Value
gene id trnav-cac_30
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035919.1
NCBI id CM008322.1
chromosome length 38085671
location 8947135 ~ 8947206 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnav-cac_30
gtttctgtagtgtagtggttatcACGTTCGCCTCACACGCGAAAGGTCCTGGTTCGAAACCAGGCAGAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnav-cac_30 True 72 tRNA 0.50 1 8947135 8947206

Neighbor

gene id symbol gene type direction distance location
trnav-aac_45 NA coding upstream 118 8946946 ~ 8947017 (+)
trnav-cac_29 NA coding upstream 307 8946756 ~ 8946828 (+)
trnav-aac_44 NA coding upstream 497 8946566 ~ 8946638 (+)
trnav-aac_43 NA coding upstream 686 8946377 ~ 8946449 (+)
trnav-aac_42 NA coding upstream 876 8946187 ~ 8946259 (+)
trnav-cac_31 NA coding downstream 118 8947324 ~ 8947396 (+)
trnav-aac_46 NA coding downstream 307 8947513 ~ 8947584 (+)
trnav-cac_32 NA coding downstream 496 8947702 ~ 8947773 (+)
trnav-aac_47 NA coding downstream 685 8947891 ~ 8947962 (+)
trnav-aac_48 NA coding downstream 873 8948079 ~ 8948150 (+)
G196314 NA non-coding upstream 15776 8931149 ~ 8931359 (+)
G196286 NA non-coding upstream 97509 8849360 ~ 8849626 (+)
G196259 NA non-coding upstream 143289 8803118 ~ 8803846 (+)
G196257 NA non-coding upstream 150749 8792633 ~ 8796386 (+)
G196238 NA non-coding upstream 166179 8741530 ~ 8780956 (+)
G196317 NA non-coding downstream 390863 9338069 ~ 9338819 (+)
G196329 NA non-coding downstream 430711 9377917 ~ 9427544 (+)
G196327 NA non-coding downstream 434544 9381750 ~ 9382549 (+)
G196396 NA non-coding downstream 660316 9607522 ~ 9608821 (+)
G196411 NA non-coding downstream 764684 9711890 ~ 9712641 (+)
G196232 NA other upstream 267165 8679284 ~ 8679970 (+)
LOC103033741 grik5,LOC108433750,LOC107549838,LOC107752523,LOC100331381,LOC107666346 other upstream 541666 8143873 ~ 8405469 (+)
G195793 NA other upstream 1653442 7293313 ~ 7293693 (+)
tapbp tapbp other upstream 1820021 7120612 ~ 7127114 (+)
LOC103021434 rxrba,LOC107566635,LOC107751683,LOC107694777,LOC107729870,LOC108272672 other upstream 1999979 6922288 ~ 6947156 (+)
mrps21 mrps21 other downstream 587223 9534429 ~ 9539648 (+)
LOC103046991 celf3a,LOC108437918,LOC107750801,LOC108272714 other downstream 656121 9603327 ~ 9638916 (+)
LOC103046684 LOC106605923,LOC107589412,LOC107582081,LOC107699547,LOC108429942 other downstream 753534 9700740 ~ 9704709 (+)
G196415 NA other downstream 773577 9720783 ~ 9721270 (+)
G196419 NA other downstream 793153 9740359 ~ 9740768 (+)

Expression


Co-expression Network