Gene
RNA
| Item | Value |
|---|---|
| gene id | G298864 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NW_019172830.1 |
| NCBI id | APWO02000048.1 |
| chromosome length | 5891159 |
| location | 95930 ~ 96295 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| id | name | namespace |
|---|---|---|
| GO:0005198 | structural molecule activity | molecular_function |
| GO:0005212 | structural constituent of eye lens | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU411114 | True | 208 | lncRNA | 0.50 | 2 | 95930 | 96295 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| hypk | hypk,LOC107596440,LOC107695358 | coding | downstream | 27981 | 124276 ~ 126588 (+) |
| vps33b | vps33b,LOC106587690 | coding | downstream | 41960 | 138255 ~ 153748 (+) |
| ttc17 | ttc17,LOC107600454,LOC107695362 | coding | downstream | 71376 | 167671 ~ 190488 (+) |
| LOC103024613 | dh12b,hsd17b12b,LOC108414037,LOC107757588,LOC107701268,LOC107695363,LOC107730274 | coding | downstream | 136511 | 232806 ~ 261021 (+) |
| LOC111191160 | NA | coding | downstream | 387475 | 483770 ~ 499002 (+) |
| G298858 | NA | non-coding | upstream | 21296 | 73214 ~ 74634 (+) |
| G298854 | NA | non-coding | upstream | 27144 | 67365 ~ 68786 (+) |
| G298857 | NA | non-coding | upstream | 33485 | 61972 ~ 62445 (+) |
| G298851 | NA | non-coding | upstream | 46183 | 40117 ~ 49747 (+) |
| G298866 | NA | non-coding | downstream | 2152 | 98447 ~ 98670 (+) |
| G298875 | NA | non-coding | downstream | 19040 | 115335 ~ 115549 (+) |
| G298868 | NA | non-coding | downstream | 38421 | 134716 ~ 135216 (+) |
| G298880 | NA | non-coding | downstream | 49681 | 145976 ~ 146693 (+) |
| G298890 | NA | non-coding | downstream | 114663 | 210958 ~ 212769 (+) |
| G298859 | NA | other | upstream | 17250 | 78480 ~ 78680 (+) |
| LOC111191161 | NA | other | upstream | 28743 | 52791 ~ 67187 (+) |
| prc1 | prc1 | other | downstream | 58670 | 154965 ~ 166097 (+) |
| G299000 | apip | other | downstream | 366119 | 462414 ~ 470620 (+) |
| G299046 | NA | other | downstream | 608865 | 705160 ~ 706824 (+) |
| G299226 | NA | other | downstream | 1121514 | 1217809 ~ 1218106 (+) |
| G299236 | NA | other | downstream | 1228125 | 1324420 ~ 1324854 (+) |
