G298866


Basic Information

Item Value
gene id G298866
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172830.1
NCBI id APWO02000048.1
chromosome length 5891159
location 98447 ~ 98670 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU411116
ATAACATTTTATCTACTCAGAATGTGATGAGCTGCTGATCTTTACTCAGACCTTGCCCAGATGTGGAGATttgattataaaatgtatttaccaTCTCGTCTGACAGTCAGTCACTgctagtagtgataggaggaacacTAACTgtgatctgtgcagaacatcctgcagatacatgtgtttctgctttctctcctgcagaactttcatttttcagcaggataatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU411116 True 224 lncRNA 0.40 1 98447 98670

Neighbor

gene id symbol gene type direction distance location
hypk hypk,LOC107596440,LOC107695358 coding downstream 25606 124276 ~ 126588 (+)
vps33b vps33b,LOC106587690 coding downstream 39585 138255 ~ 153748 (+)
ttc17 ttc17,LOC107600454,LOC107695362 coding downstream 69001 167671 ~ 190488 (+)
LOC103024613 dh12b,hsd17b12b,LOC108414037,LOC107757588,LOC107701268,LOC107695363,LOC107730274 coding downstream 134136 232806 ~ 261021 (+)
LOC111191160 NA coding downstream 385100 483770 ~ 499002 (+)
G298864 NA non-coding upstream 2152 95930 ~ 96295 (+)
G298858 NA non-coding upstream 23813 73214 ~ 74634 (+)
G298854 NA non-coding upstream 29661 67365 ~ 68786 (+)
G298857 NA non-coding upstream 36002 61972 ~ 62445 (+)
G298851 NA non-coding upstream 48700 40117 ~ 49747 (+)
G298875 NA non-coding downstream 16665 115335 ~ 115549 (+)
G298868 NA non-coding downstream 36046 134716 ~ 135216 (+)
G298880 NA non-coding downstream 47306 145976 ~ 146693 (+)
G298890 NA non-coding downstream 112288 210958 ~ 212769 (+)
G298903 NA non-coding downstream 197533 296203 ~ 331116 (+)
G298859 NA other upstream 19767 78480 ~ 78680 (+)
LOC111191161 NA other upstream 31260 52791 ~ 67187 (+)
prc1 prc1 other downstream 56295 154965 ~ 166097 (+)
G299000 apip other downstream 363744 462414 ~ 470620 (+)
G299046 NA other downstream 606490 705160 ~ 706824 (+)
G299226 NA other downstream 1119139 1217809 ~ 1218106 (+)
G299236 NA other downstream 1225750 1324420 ~ 1324854 (+)

Expression


Co-expression Network