G298880


Basic Information

Item Value
gene id G298880
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172830.1
NCBI id APWO02000048.1
chromosome length 5891159
location 145976 ~ 146693 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU411136
AGTTACAGCGTTACAGAGTTGCAGCGTTACAGAGTTGCAGCGTTACAGAGTTGCAGCGTTACAGAGTTGCAGCGTTACAGAGTTACAGCGTTACAGAGTTACAGCGTTACAGAGTTGCAGCGTTACAGAGTTACAGCGTTACAGAGTTACAGCGTTACAGAGTTACAGCGTTACAGAGTTACAGCGTTACAGAGTTACAGCGTTACAGAGCTGCAGCGTTACAGAGCTGCAGCGTTACAGCGTTACAGAGTTACAGCGTTACAGCGTTACAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU411136 True 274 lncRNA 0.47 2 145976 146693

Neighbor

gene id symbol gene type direction distance location
hypk hypk,LOC107596440,LOC107695358 coding upstream 19388 124276 ~ 126588 (+)
ttc17 ttc17,LOC107600454,LOC107695362 coding downstream 20978 167671 ~ 190488 (+)
LOC103024613 dh12b,hsd17b12b,LOC108414037,LOC107757588,LOC107701268,LOC107695363,LOC107730274 coding downstream 86113 232806 ~ 261021 (+)
LOC111191160 NA coding downstream 337077 483770 ~ 499002 (+)
LOC103040103 hrasb,hras,LOC107596435,LOC103357265,LOC107562835 coding downstream 542564 689257 ~ 701417 (+)
LOC103023516 brsk2b,LOC108444143,LOC107600443,LOC107730259 coding downstream 718540 865233 ~ 950940 (+)
G298868 NA non-coding upstream 10760 134716 ~ 135216 (+)
G298875 NA non-coding upstream 30427 115335 ~ 115549 (+)
G298866 NA non-coding upstream 47306 98447 ~ 98670 (+)
G298864 NA non-coding upstream 49681 95930 ~ 96295 (+)
G298858 NA non-coding upstream 71342 73214 ~ 74634 (+)
G298890 NA non-coding downstream 64265 210958 ~ 212769 (+)
G298903 NA non-coding downstream 149510 296203 ~ 331116 (+)
G298997 NA non-coding downstream 293220 439913 ~ 440117 (+)
G299003 NA non-coding downstream 324169 470862 ~ 473103 (+)
G299006 NA non-coding downstream 352522 499215 ~ 499615 (+)
G298859 NA other upstream 67296 78480 ~ 78680 (+)
LOC111191161 NA other upstream 78789 52791 ~ 67187 (+)
prc1 prc1 other downstream 8272 154965 ~ 166097 (+)
G299000 apip other downstream 315721 462414 ~ 470620 (+)
G299046 NA other downstream 558467 705160 ~ 706824 (+)
G299226 NA other downstream 1071116 1217809 ~ 1218106 (+)
G299236 NA other downstream 1177727 1324420 ~ 1324854 (+)

Expression


Co-expression Network