G298997


Basic Information

Item Value
gene id G298997
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172830.1
NCBI id APWO02000048.1
chromosome length 5891159
location 439913 ~ 440117 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU411294
TCAAGCCAGTGCCTCCACTCTTCTAGGGCGAGCTTCACCGCCAGGAGCTCCTTATCTCCCACGTCATACCTCTGCTCGGCAGGGGTCAGACGGTGGGAATAGTAGGCACATGGGTGCAGTCGGCCATCCAGCCCCGCCCGCTGGGACAAGACCGCACCCACGCCTACTTCAGAGGCGTCCACCTCCACGACAAATGGGAGTCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU411294 True 205 lncRNA 0.62 1 439913 440117

Neighbor

gene id symbol gene type direction distance location
LOC103024613 dh12b,hsd17b12b,LOC108414037,LOC107757588,LOC107701268,LOC107695363,LOC107730274 coding upstream 178892 232806 ~ 261021 (+)
ttc17 ttc17,LOC107600454,LOC107695362 coding upstream 249425 167671 ~ 190488 (+)
vps33b vps33b,LOC106587690 coding upstream 286165 138255 ~ 153748 (+)
hypk hypk,LOC107596440,LOC107695358 coding upstream 313325 124276 ~ 126588 (+)
LOC111191160 NA coding downstream 43653 483770 ~ 499002 (+)
LOC103040103 hrasb,hras,LOC107596435,LOC103357265,LOC107562835 coding downstream 249140 689257 ~ 701417 (+)
LOC103023516 brsk2b,LOC108444143,LOC107600443,LOC107730259 coding downstream 425116 865233 ~ 950940 (+)
LOC111191156 NA coding downstream 786475 1226592 ~ 1229189 (+)
LOC111191157 NA coding downstream 897654 1337771 ~ 1340796 (+)
G298903 NA non-coding upstream 108797 296203 ~ 331116 (+)
G298890 NA non-coding upstream 227144 210958 ~ 212769 (+)
G298880 NA non-coding upstream 293220 145976 ~ 146693 (+)
G298868 NA non-coding upstream 304697 134716 ~ 135216 (+)
G298875 NA non-coding upstream 324364 115335 ~ 115549 (+)
G299003 NA non-coding downstream 30745 470862 ~ 473103 (+)
G299006 NA non-coding downstream 59098 499215 ~ 499615 (+)
G299028 NA non-coding downstream 193724 633841 ~ 651207 (+)
G299049 NA non-coding downstream 252062 692179 ~ 692735 (+)
G299057 NA non-coding downstream 296247 736364 ~ 737381 (+)
prc1 prc1 other upstream 273816 154965 ~ 166097 (+)
G298859 NA other upstream 361233 78480 ~ 78680 (+)
LOC111191161 NA other upstream 372726 52791 ~ 67187 (+)
G299000 apip other downstream 22297 462414 ~ 470620 (+)
G299046 NA other downstream 265043 705160 ~ 706824 (+)
G299226 NA other downstream 777692 1217809 ~ 1218106 (+)
G299236 NA other downstream 884303 1324420 ~ 1324854 (+)
LOC103047296 NA other downstream 1122721 1562838 ~ 1567078 (+)

Expression


Co-expression Network