G299003


Basic Information

Item Value
gene id G299003
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172830.1
NCBI id APWO02000048.1
chromosome length 5891159
location 470862 ~ 473103 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU411305
CtgtattctttctttctgaACTCCAGATGGTGCGATATAAATGTGATCTCCATGTTTGAGGCTGATTCCTCCTCCAGTTCCGGTGACCCAGCCCAGCTGATAGAAGAGTCTGCAGAGCTCCGGGATCAGGAGTCTCGGGTGTTCCGGCTCCGCCGCCGCCGCGCTGCTCTCCCCGTTACACCGGTCATCCACCACCGAGGACATGCTGCTCCTCACCGCGGGGTTATAATACACCGATAAACCGATTTAatacagataaaataataataagtattaatattaataacaaagCAGCACCGgcagctaaccagctaactagctaaccaccACAACTacagtcactcactcactcactca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU411305 True 357 lncRNA 0.50 3 470862 473103

Neighbor

gene id symbol gene type direction distance location
LOC103024613 dh12b,hsd17b12b,LOC108414037,LOC107757588,LOC107701268,LOC107695363,LOC107730274 coding upstream 209841 232806 ~ 261021 (+)
ttc17 ttc17,LOC107600454,LOC107695362 coding upstream 280374 167671 ~ 190488 (+)
vps33b vps33b,LOC106587690 coding upstream 317114 138255 ~ 153748 (+)
hypk hypk,LOC107596440,LOC107695358 coding upstream 344274 124276 ~ 126588 (+)
LOC111191160 NA coding downstream 10667 483770 ~ 499002 (+)
LOC103040103 hrasb,hras,LOC107596435,LOC103357265,LOC107562835 coding downstream 216154 689257 ~ 701417 (+)
LOC103023516 brsk2b,LOC108444143,LOC107600443,LOC107730259 coding downstream 392130 865233 ~ 950940 (+)
LOC111191156 NA coding downstream 753489 1226592 ~ 1229189 (+)
LOC111191157 NA coding downstream 864668 1337771 ~ 1340796 (+)
G298997 NA non-coding upstream 30745 439913 ~ 440117 (+)
G298903 NA non-coding upstream 139746 296203 ~ 331116 (+)
G298890 NA non-coding upstream 258093 210958 ~ 212769 (+)
G298880 NA non-coding upstream 324169 145976 ~ 146693 (+)
G298868 NA non-coding upstream 335646 134716 ~ 135216 (+)
G299006 NA non-coding downstream 26112 499215 ~ 499615 (+)
G299028 NA non-coding downstream 160738 633841 ~ 651207 (+)
G299049 NA non-coding downstream 219076 692179 ~ 692735 (+)
G299057 NA non-coding downstream 263261 736364 ~ 737381 (+)
G299071 NA non-coding downstream 297017 770120 ~ 771703 (+)
G299000 apip other upstream 242 462414 ~ 470620 (+)
prc1 prc1 other upstream 304765 154965 ~ 166097 (+)
G298859 NA other upstream 392182 78480 ~ 78680 (+)
LOC111191161 NA other upstream 403675 52791 ~ 67187 (+)
G299046 NA other downstream 232057 705160 ~ 706824 (+)
G299226 NA other downstream 744706 1217809 ~ 1218106 (+)
G299236 NA other downstream 851317 1324420 ~ 1324854 (+)
LOC103047296 NA other downstream 1089735 1562838 ~ 1567078 (+)
G299477 NA other downstream 1714230 2187333 ~ 2204255 (+)

Expression


Co-expression Network