G299046


Basic Information

Item Value
gene id G299046
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172830.1
NCBI id APWO02000048.1
chromosome length 5891159
location 705160 ~ 706824 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU411377
TAGTCAGCTGACCGGAAGTGATTTAGCGCTAGCTGCCTGTGTAGAGCTGTAGCTGTAGAGAGTAAACAGAACTTAAAGTACCGAGTTTTCTCTTCCTAAACTCCAGAACCGGACCTGCGGTACCACTTATATACCGGAGAACCACCACAGCCACCCGCTGATACCCGATAAACATGTCTAACACTGAGACCAACCTGCGGAAACTACTGTCTAAGGCATATAAATACAGAGACCTGACTGTGCGAGAAATCACCAATGTCACCACGTCCTACAAAGACCTGAAGCCTGTGATGGATAACTACGtgtttaatGACGGCTCCACCAGAGAGCTGATGAGTCTGTCGGGGACGGTGCCGGTGAGCTATCGAGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU411377 True 370 TUCP 0.49 3 705160 706824

Neighbor

gene id symbol gene type direction distance location
LOC103040103 hrasb,hras,LOC107596435,LOC103357265,LOC107562835 coding upstream 3743 689257 ~ 701417 (+)
LOC111191160 NA coding upstream 206158 483770 ~ 499002 (+)
LOC103024613 dh12b,hsd17b12b,LOC108414037,LOC107757588,LOC107701268,LOC107695363,LOC107730274 coding upstream 444139 232806 ~ 261021 (+)
ttc17 ttc17,LOC107600454,LOC107695362 coding upstream 514672 167671 ~ 190488 (+)
vps33b vps33b,LOC106587690 coding upstream 551412 138255 ~ 153748 (+)
LOC103023516 brsk2b,LOC108444143,LOC107600443,LOC107730259 coding downstream 158409 865233 ~ 950940 (+)
LOC111191156 NA coding downstream 519768 1226592 ~ 1229189 (+)
LOC111191157 NA coding downstream 630947 1337771 ~ 1340796 (+)
LOC103044962 LOC108259203 coding downstream 677516 1384340 ~ 1413595 (+)
LOC103021976 LOC108438545 coding downstream 712212 1419036 ~ 1429239 (+)
G299049 NA non-coding upstream 12425 692179 ~ 692735 (+)
G299028 NA non-coding upstream 53953 633841 ~ 651207 (+)
G299006 NA non-coding upstream 205545 499215 ~ 499615 (+)
G299003 NA non-coding upstream 232057 470862 ~ 473103 (+)
G298997 NA non-coding upstream 265043 439913 ~ 440117 (+)
G299057 NA non-coding downstream 29540 736364 ~ 737381 (+)
G299071 NA non-coding downstream 63296 770120 ~ 771703 (+)
G299072 NA non-coding downstream 63475 770299 ~ 770603 (+)
G299079 NA non-coding downstream 87549 794373 ~ 795114 (+)
G299169 NA non-coding downstream 143861 850685 ~ 851083 (+)
G299000 apip other upstream 234540 462414 ~ 470620 (+)
prc1 prc1 other upstream 539063 154965 ~ 166097 (+)
G298859 NA other upstream 626480 78480 ~ 78680 (+)
LOC111191161 NA other upstream 637973 52791 ~ 67187 (+)
G299226 NA other downstream 510985 1217809 ~ 1218106 (+)
G299236 NA other downstream 617596 1324420 ~ 1324854 (+)
LOC103047296 NA other downstream 856014 1562838 ~ 1567078 (+)
G299477 NA other downstream 1480509 2187333 ~ 2204255 (+)
LOC103025330 si:ch211-186j3.6,LOC108442966,LOC108259100,LOC106562040,LOC105022727,LOC107696606,LOC107572394,LOC107712488,LOC107680491,LOC107565684 other downstream 1691893 2398717 ~ 2927862 (+)

Expression


Co-expression Network