G299072


Basic Information

Item Value
gene id G299072
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172830.1
NCBI id APWO02000048.1
chromosome length 5891159
location 770299 ~ 770603 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU411413
gtagagcgaTAGTAGATTGAGGTATAGTGATgttagattgaggtagagcgaTGATAGATTGAGGTATTGTGATtttagattgaggtagagtgatgttagattgaggtagagtgatggaaGATTGAGGTAGAGCGATAGAAGACTGAGGTAGAGCGTTGGAAGATTGAGGTAGAGCGTTGGAAGATTGAGGTAGAGAGATGGAAGATtggggtagagtgatggtagattgaggtagagtgatggaaGATTGAGGTAGAGCGATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU411413 True 263 lncRNA 0.42 2 770299 770603

Neighbor

gene id symbol gene type direction distance location
LOC103040103 hrasb,hras,LOC107596435,LOC103357265,LOC107562835 coding upstream 68882 689257 ~ 701417 (+)
LOC111191160 NA coding upstream 271297 483770 ~ 499002 (+)
LOC103024613 dh12b,hsd17b12b,LOC108414037,LOC107757588,LOC107701268,LOC107695363,LOC107730274 coding upstream 509278 232806 ~ 261021 (+)
ttc17 ttc17,LOC107600454,LOC107695362 coding upstream 579811 167671 ~ 190488 (+)
vps33b vps33b,LOC106587690 coding upstream 616551 138255 ~ 153748 (+)
LOC103023516 brsk2b,LOC108444143,LOC107600443,LOC107730259 coding downstream 94630 865233 ~ 950940 (+)
LOC111191156 NA coding downstream 455989 1226592 ~ 1229189 (+)
LOC111191157 NA coding downstream 567168 1337771 ~ 1340796 (+)
LOC103044962 LOC108259203 coding downstream 613737 1384340 ~ 1413595 (+)
LOC103021976 LOC108438545 coding downstream 648433 1419036 ~ 1429239 (+)
G299057 NA non-coding upstream 32918 736364 ~ 737381 (+)
G299049 NA non-coding upstream 77564 692179 ~ 692735 (+)
G299028 NA non-coding upstream 119092 633841 ~ 651207 (+)
G299006 NA non-coding upstream 270684 499215 ~ 499615 (+)
G299003 NA non-coding upstream 297196 470862 ~ 473103 (+)
G299079 NA non-coding downstream 23770 794373 ~ 795114 (+)
G299169 NA non-coding downstream 80082 850685 ~ 851083 (+)
G299181 NA non-coding downstream 91650 862253 ~ 862518 (+)
G299187 NA non-coding downstream 102543 873146 ~ 873417 (+)
G299190 NA non-coding downstream 111562 882165 ~ 882739 (+)
G299046 NA other upstream 63475 705160 ~ 706824 (+)
G299000 apip other upstream 299679 462414 ~ 470620 (+)
prc1 prc1 other upstream 604202 154965 ~ 166097 (+)
G298859 NA other upstream 691619 78480 ~ 78680 (+)
LOC111191161 NA other upstream 703112 52791 ~ 67187 (+)
G299226 NA other downstream 447206 1217809 ~ 1218106 (+)
G299236 NA other downstream 553817 1324420 ~ 1324854 (+)
LOC103047296 NA other downstream 792235 1562838 ~ 1567078 (+)
G299477 NA other downstream 1416730 2187333 ~ 2204255 (+)
LOC103025330 si:ch211-186j3.6,LOC108442966,LOC108259100,LOC106562040,LOC105022727,LOC107696606,LOC107572394,LOC107712488,LOC107680491,LOC107565684 other downstream 1628114 2398717 ~ 2927862 (+)

Expression


Co-expression Network