G299226


Basic Information

Item Value
gene id G299226
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172830.1
NCBI id APWO02000048.1
chromosome length 5891159
location 1217809 ~ 1218106 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU411607
CACCCACATGGTGAGGACATTGAGGGGGTGACTCACTGTGTTACggactacttgaatttctgtatggatgttgctgttcccacaaagacTGTACGCTGCTTTCCAAACAACAAACCCTGGATTACCAGCACCGTCAAGGACCTCCTCAACCAAAAGAAGAGGGCGTTCAAAGACGGAAACTTGGTAGAGCTGAAGCGCGTACAGGGGGAACTCAAGGTACGTCTTAAAGAGGCCAAGGAGTCTTACAGGAAGAAGGTGGAAAGAAAGCTGCAAGACAACAACATGAAGGAAGTCTGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU411607 True 298 TUCP 0.49 1 1217809 1218106

Neighbor

gene id symbol gene type direction distance location
LOC103023516 brsk2b,LOC108444143,LOC107600443,LOC107730259 coding upstream 266869 865233 ~ 950940 (+)
LOC103040103 hrasb,hras,LOC107596435,LOC103357265,LOC107562835 coding upstream 516392 689257 ~ 701417 (+)
LOC111191160 NA coding upstream 718807 483770 ~ 499002 (+)
LOC103024613 dh12b,hsd17b12b,LOC108414037,LOC107757588,LOC107701268,LOC107695363,LOC107730274 coding upstream 956788 232806 ~ 261021 (+)
ttc17 ttc17,LOC107600454,LOC107695362 coding upstream 1027321 167671 ~ 190488 (+)
LOC111191156 NA coding downstream 8486 1226592 ~ 1229189 (+)
LOC111191157 NA coding downstream 119665 1337771 ~ 1340796 (+)
LOC103044962 LOC108259203 coding downstream 166234 1384340 ~ 1413595 (+)
LOC103021976 LOC108438545 coding downstream 200930 1419036 ~ 1429239 (+)
traf6 traf6 coding downstream 274472 1492578 ~ 1502980 (+)
G299225 NA non-coding upstream 5766 1211814 ~ 1212043 (+)
G299214 NA non-coding upstream 28654 1135303 ~ 1189155 (+)
G299205 NA non-coding upstream 156134 1052123 ~ 1061675 (+)
G299199 NA non-coding upstream 173653 996768 ~ 1044156 (+)
G299179 NA non-coding upstream 264917 929944 ~ 952892 (+)
G299227 NA non-coding downstream 368 1218474 ~ 1218905 (+)
G299228 NA non-coding downstream 24815 1242921 ~ 1243476 (+)
G299229 NA non-coding downstream 76677 1294783 ~ 1295072 (+)
G299232 NA non-coding downstream 89508 1307614 ~ 1307851 (+)
G299242 NA non-coding downstream 127398 1345504 ~ 1399995 (+)
G299046 NA other upstream 510985 705160 ~ 706824 (+)
G299000 apip other upstream 747189 462414 ~ 470620 (+)
prc1 prc1 other upstream 1051712 154965 ~ 166097 (+)
G298859 NA other upstream 1139129 78480 ~ 78680 (+)
LOC111191161 NA other upstream 1150622 52791 ~ 67187 (+)
G299236 NA other downstream 106314 1324420 ~ 1324854 (+)
LOC103047296 NA other downstream 344732 1562838 ~ 1567078 (+)
G299477 NA other downstream 969227 2187333 ~ 2204255 (+)
LOC103025330 si:ch211-186j3.6,LOC108442966,LOC108259100,LOC106562040,LOC105022727,LOC107696606,LOC107572394,LOC107712488,LOC107680491,LOC107565684 other downstream 1180611 2398717 ~ 2927862 (+)
madd madd,LOC107755105 other downstream 3684528 4902634 ~ 5027421 (+)

Expression


Co-expression Network