G299494


Basic Information

Item Value
gene id G299494
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172830.1
NCBI id APWO02000048.1
chromosome length 5891159
location 2300536 ~ 2306135 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU412018
Gagcttaaagctcaccttccgtcgttttttctttcattttaaaatgtctagttgtggtctctagtatgaatgaatgacatgtgagccgtttttgtaaaaaaaaagtgctcaggtgtctctgtatagctcttttttaatggactgttttaggggtgtgtccaaaatgaccggattccagctttgctcatgaatattcatacatagatagatagatagatagatactttattgatccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU412018 True 236 lncRNA 0.36 2 2300536 2306135

Neighbor

gene id symbol gene type direction distance location
LOC103044644 NA coding upstream 719600 1579110 ~ 1580936 (+)
LOC111188231 NA coding upstream 738507 1558494 ~ 1562029 (+)
traf6 traf6 coding upstream 797556 1492578 ~ 1502980 (+)
LOC103021976 LOC108438545 coding upstream 871297 1419036 ~ 1429239 (+)
LOC103044962 LOC108259203 coding upstream 886941 1384340 ~ 1413595 (+)
tshz3 tshz3,tshz3b,LOC108429148,LOC107570485,LOC107556246,LOC107696607 coding downstream 1351724 3657859 ~ 3745126 (+)
LOC103030650 nr1h3,LOC107689968,LOC107664377,LOC107755109 coding downstream 2556061 4862196 ~ 4894687 (+)
muc15 NA coding downstream 2825758 5131893 ~ 5144884 (+)
dis3l dis3l,LOC107740444,LOC107663953,LOC107664394,LOC107755103 coding downstream 2840834 5146969 ~ 5167298 (+)
LOC103028443 crybgx,LOC103028443,LOC105906490,LOC103368872,LOC108259467,LOC102304589,LOC102204928 coding downstream 2892663 5198798 ~ 5205566 (+)
G299475 NA non-coding upstream 445750 1854585 ~ 1854786 (+)
G299472 NA non-coding upstream 454041 1846239 ~ 1846495 (+)
G299458 NA non-coding upstream 467635 1832038 ~ 1832901 (+)
G299438 NA non-coding upstream 577255 1722234 ~ 1723281 (+)
G299437 NA non-coding upstream 578437 1720922 ~ 1722099 (+)
G299496 NA non-coding downstream 9258 2315393 ~ 2315902 (+)
G299501 NA non-coding downstream 27479 2333614 ~ 2342102 (+)
G299510 NA non-coding downstream 36782 2342917 ~ 2343342 (+)
G299521 NA non-coding downstream 128403 2434538 ~ 2436421 (+)
G299545 NA non-coding downstream 501653 2807788 ~ 2808515 (+)
G299477 NA other upstream 96281 2187333 ~ 2204255 (+)
LOC103047296 NA other upstream 733458 1562838 ~ 1567078 (+)
G299236 NA other upstream 975682 1324420 ~ 1324854 (+)
G299226 NA other upstream 1082430 1217809 ~ 1218106 (+)
G299046 NA other upstream 1593712 705160 ~ 706824 (+)
LOC103025330 si:ch211-186j3.6,LOC108442966,LOC108259100,LOC106562040,LOC105022727,LOC107696606,LOC107572394,LOC107712488,LOC107680491,LOC107565684 other downstream 92582 2398717 ~ 2927862 (+)
madd madd,LOC107755105 other downstream 2596499 4902634 ~ 5027421 (+)
G299903 NA other downstream 2862491 5168626 ~ 5170108 (+)
LOC111191166 NA other downstream 2947439 5253574 ~ 5256311 (+)
LOC111191164 NA other downstream 3237677 5543812 ~ 5548569 (+)

Expression


Co-expression Network