G299510



Basic Information


Item Value
gene id G299510
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NW_019172830.1
NCBI id APWO02000048.1
chromosome length 5891159
location 2342917 ~ 2343342 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>TU412039
ttactctcctaacacctctaactaactaccttctactaccagatcaggagaatctctcactatctttaataaactcctgaagacagagctcttcaaagagcacttactctcctaacacctctaactaactaccttctactaccagatcaggagaatctctcactatctttaataaactcctgaagacagagctcttcaaagagcacttactctcttaacacctctaacacactaactacttctaacctcatttccttcttcctctccttcactcctctatcctattactcccctttgacctccttttatccctatccaaagttgtttttacctttaaacttattttacattgtacttgactattgtaagtcgctttggacaaaagcgtctgccaaatgtaatgtaatgtaatgtaatgtaatgtaa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU412039 True 426 lncRNA 0.37 1 2342917 2343342

Neighbor


gene id symbol gene type direction distance location
LOC103044644 NA coding upstream 761981 1579110 ~ 1580936 (+)
LOC111188231 NA coding upstream 780888 1558494 ~ 1562029 (+)
traf6 traf6 coding upstream 839937 1492578 ~ 1502980 (+)
LOC103021976 LOC108438545 coding upstream 913678 1419036 ~ 1429239 (+)
LOC103044962 LOC108259203 coding upstream 929322 1384340 ~ 1413595 (+)
tshz3 tshz3,tshz3b,LOC108429148,LOC107570485,LOC107556246,LOC107696607 coding downstream 1314517 3657859 ~ 3745126 (+)
LOC103030650 nr1h3,LOC107689968,LOC107664377,LOC107755109 coding downstream 2518854 4862196 ~ 4894687 (+)
muc15 NA coding downstream 2788551 5131893 ~ 5144884 (+)
dis3l dis3l,LOC107740444,LOC107663953,LOC107664394,LOC107755103 coding downstream 2803627 5146969 ~ 5167298 (+)
LOC103028443 crybgx,LOC103028443,LOC105906490,LOC103368872,LOC108259467,LOC102304589,LOC102204928 coding downstream 2855456 5198798 ~ 5205566 (+)
G299501 NA non-coding upstream 815 2333614 ~ 2342102 (+)
G299496 NA non-coding upstream 27015 2315393 ~ 2315902 (+)
G299494 NA non-coding upstream 36782 2300536 ~ 2306135 (+)
G299475 NA non-coding upstream 488131 1854585 ~ 1854786 (+)
G299472 NA non-coding upstream 496422 1846239 ~ 1846495 (+)
G299521 NA non-coding downstream 91196 2434538 ~ 2436421 (+)
G299545 NA non-coding downstream 464446 2807788 ~ 2808515 (+)
G299548 NA non-coding downstream 509512 2852854 ~ 2854096 (+)
G299557 NA non-coding downstream 575777 2919119 ~ 2961533 (+)
G299516 NA non-coding downstream 584833 2928175 ~ 2929067 (+)
G299477 NA other upstream 138662 2187333 ~ 2204255 (+)
LOC103047296 NA other upstream 775839 1562838 ~ 1567078 (+)
G299236 NA other upstream 1018063 1324420 ~ 1324854 (+)
G299226 NA other upstream 1124811 1217809 ~ 1218106 (+)
G299046 NA other upstream 1636093 705160 ~ 706824 (+)
LOC103025330 si:ch211-186j3.6,LOC108442966,LOC108259100,LOC106562040,LOC105022727,LOC107696606,LOC107572394,LOC107712488,LOC107680491,LOC107565684 other downstream 55375 2398717 ~ 2927862 (+)
madd madd,LOC107755105 other downstream 2559292 4902634 ~ 5027421 (+)
G299903 NA other downstream 2825284 5168626 ~ 5170108 (+)
LOC111191166 NA other downstream 2910232 5253574 ~ 5256311 (+)
LOC111191164 NA other downstream 3200470 5543812 ~ 5548569 (+)

Expression



Co-expression Network