G299679


Basic Information

Item Value
gene id G299679
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172830.1
NCBI id APWO02000048.1
chromosome length 5891159
location 3360289 ~ 3360553 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU412230
atttatttattcatttatttatttaaacatttatttatttatacttatgtcatttttggtcctccatagtaaacacgcctgctttggtttttcacactgctgacCTGCCTGCAGTTACAGCGTCCGCTCACAACTCCTCCCTCCTTCTGATCTATAAATCATGCAGAGTACGTGTTGGATAGGGTCTGACTGGCTACAACCTCACCATACACTATAGTGATGCTTCTCTACTACAGGAACAAATATTcccaacttttccactgag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU412230 True 265 lncRNA 0.39 1 3360289 3360553

Neighbor

gene id symbol gene type direction distance location
LOC103044644 NA coding upstream 1779353 1579110 ~ 1580936 (+)
LOC111188231 NA coding upstream 1798260 1558494 ~ 1562029 (+)
traf6 traf6 coding upstream 1857309 1492578 ~ 1502980 (+)
LOC103021976 LOC108438545 coding upstream 1931050 1419036 ~ 1429239 (+)
LOC103044962 LOC108259203 coding upstream 1946694 1384340 ~ 1413595 (+)
tshz3 tshz3,tshz3b,LOC108429148,LOC107570485,LOC107556246,LOC107696607 coding downstream 297306 3657859 ~ 3745126 (+)
LOC103030650 nr1h3,LOC107689968,LOC107664377,LOC107755109 coding downstream 1501643 4862196 ~ 4894687 (+)
muc15 NA coding downstream 1771340 5131893 ~ 5144884 (+)
dis3l dis3l,LOC107740444,LOC107663953,LOC107664394,LOC107755103 coding downstream 1786416 5146969 ~ 5167298 (+)
LOC103028443 crybgx,LOC103028443,LOC105906490,LOC103368872,LOC108259467,LOC102304589,LOC102204928 coding downstream 1838245 5198798 ~ 5205566 (+)
G299670 NA non-coding upstream 131279 3228619 ~ 3229010 (+)
G299669 NA non-coding upstream 160098 3199945 ~ 3200191 (+)
G299641 NA non-coding upstream 297167 3062821 ~ 3063122 (+)
G299640 NA non-coding upstream 329303 3029564 ~ 3030986 (+)
G299561 NA non-coding upstream 423850 2936058 ~ 2936439 (+)
G299685 NA non-coding downstream 35078 3395631 ~ 3396080 (+)
G299694 NA non-coding downstream 179782 3540335 ~ 3541034 (+)
G299700 NA non-coding downstream 196878 3557431 ~ 3557840 (+)
G299712 NA non-coding downstream 336551 3697104 ~ 3705830 (+)
G299744 NA non-coding downstream 428711 3789264 ~ 3789471 (+)
LOC103025330 si:ch211-186j3.6,LOC108442966,LOC108259100,LOC106562040,LOC105022727,LOC107696606,LOC107572394,LOC107712488,LOC107680491,LOC107565684 other upstream 432427 2398717 ~ 2927862 (+)
G299477 NA other upstream 1156034 2187333 ~ 2204255 (+)
LOC103047296 NA other upstream 1793211 1562838 ~ 1567078 (+)
G299236 NA other upstream 2035435 1324420 ~ 1324854 (+)
G299226 NA other upstream 2142183 1217809 ~ 1218106 (+)
madd madd,LOC107755105 other downstream 1542081 4902634 ~ 5027421 (+)
G299903 NA other downstream 1808073 5168626 ~ 5170108 (+)
LOC111191166 NA other downstream 1893021 5253574 ~ 5256311 (+)
LOC111191164 NA other downstream 2183259 5543812 ~ 5548569 (+)
LOC111191158 skor1a,LOC108430798,LOC108259147,LOC107563488,LOC107663943,LOC107553092 other downstream 2190540 5551093 ~ 5556428 (+)

Expression


Co-expression Network