hypk (hypk,LOC107596440,LOC107695358)


Basic Information

Item Value
gene id hypk
gene name hypk,LOC107596440,LOC107695358
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172830.1
NCBI id APWO02000048.1
chromosome length 5891159
location 124276 ~ 126588 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007240744.3
TACACTGATCTGTTTCCGGGTGGTAATAAGGGAGCGCGGCTGTGGTTCCGGGCGGCAGTAGGAGGAAACATGGCGGCGGAGGGAGATGTGGATCTGGATCTGGAGGCGGAGGAGAACTGCACCGGGAAGCCCACAGAGAAACCCCGCAAACACGACAGCGGCGCGGCGGATCTGGAGCGGGTGACGGACTATGCGGAGGAGAAGGAGATTTCCAGCTCGGACCTGGAGACGGCGATGTCCGTGATCGGAGACAGGAGATCCAGAGAACAGAAGGCGAAACAGGAACGAGAAAAAGAATTGGCTAAAGTGACGATTAAGAAGGAGGATGTGGAGCTGATAATGGGGGAGATGGAGATCTCGCGAGGTGTGGCGGAGCGAAGTCTGAGAGAACACATGGGGAACGTGGTGGAGGCGCTGATCACCCTGACCAACtgaacattacacacacacacacacacacacacacacacacacacacacacaacacacacacacacaacacac

Function

symbol description
hypk Predicted to be involved in negative regulation of apoptotic process and protein stabilization. Orthologous to human HYPK (huntingtin interacting protein K).

NR:

description
PREDICTED: huntingtin-interacting protein K

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007240744.3 True 504 mRNA 0.56 4 124276 126588

Neighbor

gene id symbol gene type direction distance location
vps33b vps33b,LOC106587690 coding downstream 11667 138255 ~ 153748 (+)
ttc17 ttc17,LOC107600454,LOC107695362 coding downstream 41083 167671 ~ 190488 (+)
LOC103024613 dh12b,hsd17b12b,LOC108414037,LOC107757588,LOC107701268,LOC107695363,LOC107730274 coding downstream 106218 232806 ~ 261021 (+)
LOC111191160 NA coding downstream 357182 483770 ~ 499002 (+)
LOC103040103 hrasb,hras,LOC107596435,LOC103357265,LOC107562835 coding downstream 562669 689257 ~ 701417 (+)
G298875 NA non-coding upstream 8727 115335 ~ 115549 (+)
G298866 NA non-coding upstream 25606 98447 ~ 98670 (+)
G298864 NA non-coding upstream 27981 95930 ~ 96295 (+)
G298858 NA non-coding upstream 49642 73214 ~ 74634 (+)
G298854 NA non-coding upstream 55490 67365 ~ 68786 (+)
G298868 NA non-coding downstream 8128 134716 ~ 135216 (+)
G298880 NA non-coding downstream 19388 145976 ~ 146693 (+)
G298890 NA non-coding downstream 84370 210958 ~ 212769 (+)
G298903 NA non-coding downstream 169615 296203 ~ 331116 (+)
G298997 NA non-coding downstream 313325 439913 ~ 440117 (+)
G298859 NA other upstream 45596 78480 ~ 78680 (+)
LOC111191161 NA other upstream 57089 52791 ~ 67187 (+)
prc1 prc1 other downstream 28377 154965 ~ 166097 (+)
G299000 apip other downstream 335826 462414 ~ 470620 (+)
G299046 NA other downstream 578572 705160 ~ 706824 (+)
G299226 NA other downstream 1091221 1217809 ~ 1218106 (+)
G299236 NA other downstream 1197832 1324420 ~ 1324854 (+)

Expression


Co-expression Network