LOC111191156


Basic Information

Item Value
gene id LOC111191156
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172830.1
NCBI id APWO02000048.1
chromosome length 5891159
location 1226592 ~ 1229189 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022665234.1
ATGAGacacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACATCCACATGAGacacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTGAgccaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccatCTGAGACACTACAACATCCACATGAGacacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACATCCACATGAGacacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACAACCAGCTgagacaccacaacaaccacctgagacactacAACATTGAGATGTTATTGGAGATGTTATTTGAGATGTTATTGGAGATTGGTTATTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022665234.1 True 2598 mRNA 0.49 1 1226592 1229189

Neighbor

gene id symbol gene type direction distance location
LOC103023516 brsk2b,LOC108444143,LOC107600443,LOC107730259 coding upstream 275652 865233 ~ 950940 (+)
LOC103040103 hrasb,hras,LOC107596435,LOC103357265,LOC107562835 coding upstream 525175 689257 ~ 701417 (+)
LOC111191160 NA coding upstream 727590 483770 ~ 499002 (+)
LOC103024613 dh12b,hsd17b12b,LOC108414037,LOC107757588,LOC107701268,LOC107695363,LOC107730274 coding upstream 965571 232806 ~ 261021 (+)
ttc17 ttc17,LOC107600454,LOC107695362 coding upstream 1036104 167671 ~ 190488 (+)
LOC111191157 NA coding downstream 108582 1337771 ~ 1340796 (+)
LOC103044962 LOC108259203 coding downstream 155151 1384340 ~ 1413595 (+)
LOC103021976 LOC108438545 coding downstream 189847 1419036 ~ 1429239 (+)
traf6 traf6 coding downstream 263389 1492578 ~ 1502980 (+)
LOC111188231 NA coding downstream 329305 1558494 ~ 1562029 (+)
G299227 NA non-coding upstream 7687 1218474 ~ 1218905 (+)
G299225 NA non-coding upstream 14549 1211814 ~ 1212043 (+)
G299214 NA non-coding upstream 37437 1135303 ~ 1189155 (+)
G299205 NA non-coding upstream 164917 1052123 ~ 1061675 (+)
G299199 NA non-coding upstream 182436 996768 ~ 1044156 (+)
G299228 NA non-coding downstream 13732 1242921 ~ 1243476 (+)
G299229 NA non-coding downstream 65594 1294783 ~ 1295072 (+)
G299232 NA non-coding downstream 78425 1307614 ~ 1307851 (+)
G299242 NA non-coding downstream 116315 1345504 ~ 1399995 (+)
G299243 NA non-coding downstream 117476 1346665 ~ 1348801 (+)
G299226 NA other upstream 8486 1217809 ~ 1218106 (+)
G299046 NA other upstream 519768 705160 ~ 706824 (+)
G299000 apip other upstream 755972 462414 ~ 470620 (+)
prc1 prc1 other upstream 1060495 154965 ~ 166097 (+)
G298859 NA other upstream 1147912 78480 ~ 78680 (+)
G299236 NA other downstream 95231 1324420 ~ 1324854 (+)
LOC103047296 NA other downstream 333649 1562838 ~ 1567078 (+)
G299477 NA other downstream 958144 2187333 ~ 2204255 (+)
LOC103025330 si:ch211-186j3.6,LOC108442966,LOC108259100,LOC106562040,LOC105022727,LOC107696606,LOC107572394,LOC107712488,LOC107680491,LOC107565684 other downstream 1169528 2398717 ~ 2927862 (+)
madd madd,LOC107755105 other downstream 3673445 4902634 ~ 5027421 (+)

Expression


Co-expression Network