G1702


Basic Information

Item Value
gene id G1702
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 5439217 ~ 5442140 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU2303
caggcttgccactcacttacagtctttaacaaaactaggagagctaaaaccattctACCCCAAATAGGCTACCAACAGAACCAAGTGACTAAACTCACTACTCACTTACTTTATGGTGAGTGCCCTAAACAGCACCCATCTGCATGGCCCCTCCCCATACCCTAGGTTACGGGGGAGGTACCAACTATGTAGGCTAGAGCAACACAGCACACATAGCACAACAGAACACAtaaggccacacacacaacccagagccgccacattatataagaccaattggtac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2303 True 283 lncRNA 0.39 2 5439217 5442140

Neighbor

gene id symbol gene type direction distance location
coq8b coq8b,LOC108442867 coding upstream 79867 5335881 ~ 5359350 (+)
slc5a2 slc5a2,LOC107678242 coding upstream 116662 5308555 ~ 5322555 (+)
LOC103030600 si:dkey-260j18.2,LOC103030600,LOC108442862,LOC108278347,LOC105903253,LOC107758546,LOC107561384 coding upstream 141247 5291106 ~ 5297970 (+)
LOC111192937 NA coding upstream 273778 5102073 ~ 5165439 (+)
rhbdd1 NA coding upstream 472987 4952575 ~ 4966230 (+)
LOC103027419 dpf1,LOC107672425,LOC107561370,LOC107749650 coding downstream 59079 5501219 ~ 5595495 (+)
LOC103026943 LOC103026943,LOC108278393 coding downstream 171603 5613743 ~ 5618836 (+)
LOC103031751 NA coding downstream 189256 5631396 ~ 5656055 (+)
LOC111194277 NA coding downstream 875165 6317305 ~ 6327911 (+)
LOC103031157 LOC108442282,LOC107594665,LOC107710606,LOC107700523 coding downstream 939646 6381786 ~ 6405982 (+)
G1692 NA non-coding upstream 67365 5371341 ~ 5371852 (+)
G1639 NA non-coding upstream 134003 5303504 ~ 5305214 (+)
G1637 NA non-coding upstream 136139 5301373 ~ 5303078 (+)
G1638 NA non-coding upstream 137999 5300659 ~ 5301218 (+)
G1640 NA non-coding upstream 139340 5298337 ~ 5299877 (+)
G1837 NA non-coding downstream 343686 5785826 ~ 5786057 (+)
G1873 NA non-coding downstream 486017 5928157 ~ 5928697 (+)
G1897 NA non-coding downstream 891049 6333189 ~ 6334080 (+)
G1902 NA non-coding downstream 908371 6350511 ~ 6351012 (+)
G1916 NA non-coding downstream 975183 6417323 ~ 6417565 (+)
LOC111192942 NA other upstream 162229 5250484 ~ 5276988 (+)
LOC103026740 NA other upstream 195030 5171375 ~ 5244187 (+)
G1127 LOC107669897,LOC107733923,LOC107558818 other upstream 1452489 3981824 ~ 3986728 (+)
kcne4 NA other upstream 1642669 3794819 ~ 3796548 (+)
G1045 NA other upstream 1989575 3448476 ~ 3449642 (+)
pnkp pnkp,LOC107749649,LOC107672387,LOC107561379,LOC107758514 other downstream 238886 5681026 ~ 5703183 (+)
rwdd3 rwdd3 other downstream 966706 6408846 ~ 6414794 (+)
LOC103030091 ptbp2,ptbp2b,LOC103030091,LOC108442283,LOC107594658,LOC107718150,LOC107570490,LOC108277987 other downstream 1071004 6513144 ~ 6554450 (+)
G2304 NA other downstream 3117926 8560066 ~ 8560478 (+)
G2358 LOC108432992,LOC101077340,LOC100691215,LOC101465674 other downstream 3290583 8732723 ~ 8734952 (+)

Expression


Co-expression Network