G2124


Basic Information

Item Value
gene id G2124
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 7622811 ~ 7623261 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU2838
GTTACtaaggagagaactaagttaaGGGTAGAGCTAGCCAACATttgcagagagctagctaacgttaaaggaatgagaactaaggttagcagagttaacattagcagcgcgctagctaacatactaacgttagcggcgagctgcctaatgttactggggagagaactacggTAAGGGTAGAGCTAGCCAACATTTGCAGAGAACTAGCTAATGTTAAAGGAatgagaactaaggttagcagagttaacattagcagtgcacaagctaacatactaacgttagtggcgagctagttaacgttactggggagagaactaaggttagcgtaaagctagctaacattagctgcgagctagctaacattactgggaagagaactaaggttagcgtagagattagcgtagagcta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2838 True 409 lncRNA 0.46 2 7622811 7623261

Neighbor

gene id symbol gene type direction distance location
LOC111192949 NA coding upstream 349504 7270865 ~ 7273307 (+)
LOC103038844 NA coding upstream 420245 7189480 ~ 7202566 (+)
LOC103039155 NA coding upstream 434238 7181782 ~ 7188573 (+)
LOC111194639 NA coding upstream 455011 7162246 ~ 7167800 (+)
LOC103041009 NA coding upstream 601829 7015308 ~ 7020982 (+)
LOC111192950 LOC108432968 coding downstream 1053401 8676662 ~ 8697582 (+)
LOC103023232 NA coding downstream 1183906 8807167 ~ 8816687 (+)
LOC103027547 NA coding downstream 1187987 8811248 ~ 8813220 (+)
LOC111194918 NA coding downstream 1199229 8822490 ~ 8826360 (+)
LOC103022922 LOC103022922,LOC108277434 coding downstream 1214111 8837372 ~ 8839379 (+)
G2047 NA non-coding upstream 416133 7206347 ~ 7206678 (+)
G2032 NA non-coding upstream 423896 7147760 ~ 7198915 (+)
G2039 dhx16,LOC107704755 non-coding upstream 444987 7176583 ~ 7177824 (+)
G2025 NA non-coding upstream 489615 7131207 ~ 7133196 (+)
G1980 NA non-coding upstream 740472 6880551 ~ 6882339 (+)
G2125 NA non-coding downstream 84936 7708197 ~ 7745912 (+)
G2174 NA non-coding downstream 254472 7877733 ~ 7879526 (+)
G2326 NA non-coding downstream 1004387 8627648 ~ 8627911 (+)
G2328 NA non-coding downstream 1006536 8629797 ~ 8630847 (+)
G2362 stim1,LOC108277929,LOC108432992,LOC101465674,LOC100691215,LOC102214188 non-coding downstream 1119755 8743016 ~ 8787010 (+)
LOC103030091 ptbp2,ptbp2b,LOC103030091,LOC108442283,LOC107594658,LOC107718150,LOC107570490,LOC108277987 other upstream 1068361 6513144 ~ 6554450 (+)
rwdd3 rwdd3 other upstream 1208017 6408846 ~ 6414794 (+)
pnkp pnkp,LOC107749649,LOC107672387,LOC107561379,LOC107758514 other upstream 1919628 5681026 ~ 5703183 (+)
LOC111192942 NA other upstream 2345823 5250484 ~ 5276988 (+)
LOC103026740 NA other upstream 2378624 5171375 ~ 5244187 (+)
G2304 NA other downstream 936805 8560066 ~ 8560478 (+)
G2358 LOC108432992,LOC101077340,LOC100691215,LOC101465674 other downstream 1109462 8732723 ~ 8734952 (+)
lyrm9 lyrm9,LOC102789908 other downstream 1321200 8944461 ~ 8957392 (+)
G2509 NA other downstream 2008604 9631865 ~ 9670125 (+)
LOC103039705 gdpd5b,gdpd5,LOC103039705,LOC108433002,LOC108277648,LOC107666190,LOC107682503 other downstream 2010832 9634093 ~ 9743491 (+)

Expression


Co-expression Network